diff --git a/.gitignore b/.gitignore index ffc7076..002795b 100644 --- a/.gitignore +++ b/.gitignore @@ -1,8 +1,6 @@ /build -*.csv - eatraw eatdev @@ -15,4 +13,3 @@ nohup.out raw_eater.cpp *.o - diff --git a/lib/parquet/parquet-low-level-example b/lib/parquet/parquet-low-level-example deleted file mode 100755 index 1450c6a..0000000 Binary files a/lib/parquet/parquet-low-level-example and /dev/null differ diff --git a/lib/parquet/parquet_cpp_example.parquet b/lib/parquet/parquet_cpp_example.parquet deleted file mode 100644 index 5fd9fbe..0000000 Binary files a/lib/parquet/parquet_cpp_example.parquet and /dev/null differ diff --git a/lib/pyarrow_arm/Dockerfile b/lib/pyarrow_arm/Dockerfile new file mode 100644 index 0000000..5f1a018 --- /dev/null +++ b/lib/pyarrow_arm/Dockerfile @@ -0,0 +1,26 @@ + +FROM ubuntu:19.10 + +RUN apt-get update -y && apt-get install -y \ + apt-utils \ + git g++ \ + make cmake \ + pkg-config \ + #build-essentials \ + python3 \ + python3-setuptools \ + cython3 \ + python3-numpy + +RUN git clone https://github.com/apache/arrow.git --single-branch --depth=1 + +COPY . ./ + +RUN chmod u+x ./build_arrow_cpp.sh +RUN chmod u+x ./build_arrow_python.sh +RUN ./build_arrow_cpp.sh +RUN ./build_arrow_python.sh + +#RUN chmod u+x ./build_arrow.sh +#CMD ["./build_arrow.sh"] +CMD ["sleep 1d"] diff --git a/lib/pyarrow_arm/build_arrow.sh b/lib/pyarrow_arm/build_arrow.sh new file mode 100755 index 0000000..a6787df --- /dev/null +++ b/lib/pyarrow_arm/build_arrow.sh @@ -0,0 +1,65 @@ +#!/bin/bash + +sleep infinity + +startts=$(date) +echo "starting build process at ${startts}..." + +echo -e "\nhome directory is..." +pwd + +echo -e "\ncloning apache/arrow..." +git clone https://github.com/apache/arrow.git --single-branch --depth=1 + +echo -e "\nls -lh /\n" +ls -lh / + +echo -e "\nls -lh arrow/\n" +ls -lh arrow/ + +echo -e "\nls -lh arrow/python/\n" +ls -lh arrow/python + + +mkdir arrow/cpp/build +pushd arrow/cpp/build + +cmake -DCMAKE_INSTALL_PREFIX=$ARROW_HOME \ + -DCMAKE_INSTALL_LIBDIR=lib \ + -DARROW_WITH_BZ2=ON \ + -DARROW_WITH_ZLIB=ON \ + -DARROW_WITH_ZSTD=ON \ + -DARROW_WITH_LZ4=ON \ + -DARROW_WITH_SNAPPY=ON \ + -DARROW_WITH_BROTLI=ON \ + -DARROW_PARQUET=ON \ + -DARROW_PYTHON=ON \ + -DARROW_BUILD_TESTS=OFF \ + -DARROW_WITH_HDFS=OFF \ + .. + +make -j4 +make install +popd + +#cython --version +cython3 --version + +pushd arrow/python +export ARROW_LIB_DIR=/lib/ +export PYARROW_WITH_PARQUET=1 +export PYARROW_WITH_CUDA=0 +export PYARROW_WITH_FlIGHT=0 +export PYARROW_WITH_DATASET=0 +export PYARROW_WITH_ORC=0 +export PYARROW_WITH_PLASMA=0 +export PYARROW_WITH_S3FS=0 +export PYARROW_WITH_HDFS=0 +export PYARROW_WITH_GANDIVA=0 +python3 setup.py build_ext --inplace +popd + +echo " started build process at ${startts} ..." +finishts=$(date) +echo "finishing build process at ${finishts}..." + diff --git a/lib/pyarrow_arm/build_arrow_cpp.sh b/lib/pyarrow_arm/build_arrow_cpp.sh new file mode 100755 index 0000000..3eeaefb --- /dev/null +++ b/lib/pyarrow_arm/build_arrow_cpp.sh @@ -0,0 +1,23 @@ +#!/bin/bash + +mkdir arrow/cpp/build +pushd arrow/cpp/build + +cmake -DCMAKE_INSTALL_PREFIX=$ARROW_HOME \ + -DCMAKE_INSTALL_LIBDIR=lib \ + -DARROW_WITH_BZ2=ON \ + -DARROW_WITH_ZLIB=ON \ + -DARROW_WITH_ZSTD=ON \ + -DARROW_WITH_LZ4=ON \ + -DARROW_WITH_SNAPPY=ON \ + -DARROW_WITH_BROTLI=ON \ + -DARROW_PARQUET=ON \ + -DARROW_PYTHON=ON \ + -DARROW_BUILD_TESTS=OFF \ + -DARROW_WITH_HDFS=OFF \ + -DARROW_WITH_IPC=OFF \ + .. + +make -j4 +make install +popd diff --git a/lib/pyarrow_arm/build_arrow_python.sh b/lib/pyarrow_arm/build_arrow_python.sh new file mode 100755 index 0000000..c2aec8a --- /dev/null +++ b/lib/pyarrow_arm/build_arrow_python.sh @@ -0,0 +1,15 @@ +#!/bin/bash + +pushd arrow/python +export PYARROW_WITH_PARQUET=1 +export PYARROW_WITH_CUDA=0 +export PYARROW_WITH_FlIGHT=0 +export PYARROW_WITH_DATASET=0 +export PYARROW_WITH_ORC=0 +export PYARROW_WITH_PLASMA=0 +export PYARROW_WITH_S3FS=0 +export PYARROW_WITH_HDFS=0 +export PYARROW_WITH_GANDIVA=0 +# python3 setup.py build_ext --inplace +python3 setup.py install +popd diff --git a/lib/pyarrow_arm/makefile b/lib/pyarrow_arm/makefile new file mode 100644 index 0000000..e03170b --- /dev/null +++ b/lib/pyarrow_arm/makefile @@ -0,0 +1,23 @@ + +build : + docker build . --tag pyarrowbuild + +run : + docker run -it pyarrowbuild:latest + +run-bash : + docker run -it --volume=$(pwd)/build:/home pyarrowbuild:latest /bin/bash + +run-volume : + docker run -it -v /home/pirate/pyarrow/build/:/arrow/python/ pyarrowbuild:latest + #sudo docker run -it --volume=$(pwd)/build:/home ubuntu:latest /bin/bash + +rm-container : + cont=$(docker ps -a | tail -n 26 | awk '{print $NF}' | sed ':a;N;$!ba;s/\n/ /g') + echo ${cont} + docker rm ${cont} + +rm-image : + img=$(docker image ls --quiet | sed ':a;N;$!ba;s/\n/ /g') + docker image rm ${img} + diff --git a/lib/pyarrow_arm/pressureVacuum.csv b/lib/pyarrow_arm/pressureVacuum.csv new file mode 100644 index 0000000..d2cb44f --- 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pv.read_csv(csvfile,parse_options=pv.ParseOptions(delimiter=',')) + +print(tb) + +parquetfile = 'pressureVacuum.parquet' + +pq.write_table(tb,parquetfile,compression='SNAPPY') +# {‘NONE’, ‘SNAPPY’, ‘GZIP’, ‘LZO’, ‘BROTLI’, ‘LZ4’, ‘ZSTD’} + +df = pq.read_table(parquetfile,columns=None) + +print(df) diff --git a/lib/pyarrow_arm/sync_pi.sh b/lib/pyarrow_arm/sync_pi.sh new file mode 100755 index 0000000..5a68d1a --- /dev/null +++ b/lib/pyarrow_arm/sync_pi.sh @@ -0,0 +1,8 @@ +#!/bin/bash + +if [ -z "$1" ] +then + exit 1 +fi + +scp $1 pirate@mf-pi-40:/home/pirate/pyarrow/ diff --git a/setup.py b/setup.py index 005883a..4ae46d5 100644 --- a/setup.py +++ b/setup.py @@ -4,6 +4,10 @@ from Cython.Build import cythonize extensions = Extension( name="raw_eater", + version="0.1.0", + author="Mario Fink", + author_email="mario.fink@record-evolution.de", + url="https://github.com/RecordEvolution/raw_eater.git", sources=["raw_eater.pyx"], # libraries=[""], library_dirs=["src"], diff --git a/src/main.cpp b/src/main.cpp index d4d708c..eb4d4d7 100644 --- a/src/main.cpp +++ b/src/main.cpp @@ -57,8 +57,8 @@ int main(int argc, char* argv[]) // for ( unsigned long int i = 0; i < 10; i++ ) std::cout<