Compare commits
11 Commits
Author | SHA1 | Date | |
---|---|---|---|
724f3d0bb9 | |||
06c5710412 | |||
b45fae576f | |||
55f093156d | |||
ff69c329cc | |||
d0accd6e0b | |||
89b7f045a4 | |||
46db4f3fe8 | |||
ef0bb7550d | |||
730b3dad83 | |||
9c69e94102 |
@@ -9,6 +9,8 @@
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#include <math.h>
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#include <math.h>
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#include <chrono>
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#include <chrono>
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#include <ctime>
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#include <ctime>
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#include <time.h>
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#include <iconv.h>
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//---------------------------------------------------------------------------//
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//---------------------------------------------------------------------------//
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@@ -142,6 +144,78 @@ namespace imc
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return sumstr;
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return sumstr;
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}
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}
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// convert encoding of any descriptions, channel-names, units etc.
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class iconverter
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{
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std::string in_enc_, out_enc_;
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iconv_t cd_;
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size_t out_buffer_size_;
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public:
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iconverter(std::string in_enc, std::string out_enc, size_t out_buffer_size = 1024) :
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in_enc_(in_enc), out_enc_(out_enc), out_buffer_size_(out_buffer_size)
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{
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// allocate descriptor for character set conversion
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// (https://man7.org/linux/man-pages/man3/iconv_open.3.html)
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cd_ = iconv_open(out_enc.c_str(), in_enc.c_str());
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if ( (iconv_t)-1 == cd_ )
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{
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if ( errno == EINVAL )
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{
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std::string errmsg = std::string("The encoding conversion from ") + in_enc
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+ std::string(" to ") + out_enc + std::string(" is not supported by the implementation.");
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throw std::runtime_error(errmsg);
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}
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}
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}
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void convert(std::string &astring)
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{
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if ( astring.empty() ) return;
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std::vector<char> in_buffer(astring.begin(),astring.end());
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char *inbuf = &in_buffer[0];
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size_t inbytes = in_buffer.size();
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std::vector<char> out_buffer(out_buffer_size_);
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char *outbuf = &out_buffer[0];
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size_t outbytes = out_buffer.size();
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// perform character set conversion
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// ( - https://man7.org/linux/man-pages/man3/iconv.3.html
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// - https://www.ibm.com/docs/en/zos/2.2.0?topic=functions-iconv-code-conversion )
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while ( inbytes > 0 )
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{
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size_t res = iconv(cd_,&inbuf,&inbytes,&outbuf,&outbytes);
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if ( (size_t)-1 == res )
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{
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std::string errmsg;
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if ( errno == EILSEQ )
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{
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errmsg = std::string("An invalid multibyte sequence is encountered in the input.");
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throw std::runtime_error(errmsg);
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}
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else if ( errno == EINVAL )
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{
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errmsg = std::string("An incomplete multibyte sequence is encountered in the input")
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+ std::string(" and the input byte sequence terminates after it.");
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}
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else if ( errno == E2BIG )
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{
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errmsg = std::string("The output buffer has no more room for the next converted character.");
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}
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throw std::runtime_error(errmsg);
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}
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}
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std::string outstring(out_buffer.begin(),out_buffer.end()-outbytes);
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astring = outstring;
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}
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};
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// channel
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// channel
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struct channel
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struct channel
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{
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{
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@@ -301,9 +375,12 @@ namespace imc
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double secs_int;
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double secs_int;
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trigger_time_frac_secs_ = modf((double)secs,&secs_int);
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trigger_time_frac_secs_ = modf((double)secs,&secs_int);
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tms.tm_sec = (int)secs_int;
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tms.tm_sec = (int)secs_int;
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//tms.tm_isdst = -1;
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// generate std::chrono::system_clock::time_point type
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// generate std::chrono::system_clock::time_point type
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std::time_t ts = std::mktime(&tms);
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// ( - https://www.gnu.org/software/libc/manual/html_node/Broken_002ddown-Time.html
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// - https://man7.org/linux/man-pages/man3/tzset.3.html )
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std::time_t ts = timegm(&tms); //std::mktime(&tms);
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trigger_time_ = std::chrono::system_clock::from_time_t(ts);
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trigger_time_ = std::chrono::system_clock::from_time_t(ts);
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}
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}
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@@ -313,21 +390,24 @@ namespace imc
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// calculate absolute trigger-time
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// calculate absolute trigger-time
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absolute_trigger_time_ = trigger_time_ + std::chrono::seconds(addtime_);
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absolute_trigger_time_ = trigger_time_ + std::chrono::seconds(addtime_);
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// + std::chrono::nanoseconds((long int)(trigger_time_frac_secs_*1.e9));
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// + std::chrono::nanoseconds((long int)(trigger_time_frac_secs_*1.e9));
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// convert any non-UTF-8 codepage to UTF-8
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convert_encoding();
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}
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}
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// convert buffer to actual datatype
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// convert buffer to actual datatype
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void convert_buffer()
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void convert_buffer()
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{
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{
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// TODO no clue how/if/when to handle buffer offset/mask/subsequent_bytes
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// etc. and whatever that shit is!
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std::vector<imc::parameter> prms = blocks_->at(chnenv_.CSuuid_).get_parameters();
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std::vector<imc::parameter> prms = blocks_->at(chnenv_.CSuuid_).get_parameters();
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if ( prms.size() < 4)
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if ( prms.size() < 4)
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{
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{
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throw std::runtime_error("CS block is invalid and features to few parameters");
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throw std::runtime_error("CS block is invalid and features to few parameters");
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}
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}
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// extract (channel dependent) part of buffer
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unsigned long int buffstrt = prms[3].begin();
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unsigned long int buffstrt = prms[3].begin();
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std::vector<unsigned char> CSbuffer( buffer_->begin()+buffstrt+1,
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std::vector<unsigned char> CSbuffer( buffer_->begin()+buffstrt+buffer_offset_+1,
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buffer_->begin()+buffstrt+buffer_size_+1 );
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buffer_->begin()+buffstrt+buffer_offset_+buffer_size_+1 );
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// determine number of values in buffer
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// determine number of values in buffer
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unsigned long int num_values = (unsigned long int)(CSbuffer.size()/(signbits_/8));
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unsigned long int num_values = (unsigned long int)(CSbuffer.size()/(signbits_/8));
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@@ -400,6 +480,33 @@ namespace imc
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}
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}
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}
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}
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// convert any description, units etc. to UTF-8 (by default)
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void convert_encoding()
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{
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if ( !codepage_.empty() )
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{
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// construct iconv-compatible name for respective codepage
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std::string cpn = std::string("CP") + codepage_;
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// set up converter
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std::string utf = std::string("UTF-8");
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iconverter conv(cpn,utf);
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conv.convert(name_);
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conv.convert(comment_);
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conv.convert(origin_);
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conv.convert(origin_comment_);
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conv.convert(text_);
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conv.convert(language_code_);
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conv.convert(yname_);
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conv.convert(yunit_);
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conv.convert(xname_);
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conv.convert(xunit_);
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conv.convert(group_name_);
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conv.convert(group_comment_);
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}
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}
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// get info string
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// get info string
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std::string get_info(int width = 20)
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std::string get_info(int width = 20)
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{
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{
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@@ -413,8 +520,8 @@ namespace imc
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<<std::setw(width)<<std::left<<"comment:"<<comment_<<"\n"
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<<std::setw(width)<<std::left<<"comment:"<<comment_<<"\n"
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<<std::setw(width)<<std::left<<"origin:"<<origin_<<"\n"
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<<std::setw(width)<<std::left<<"origin:"<<origin_<<"\n"
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<<std::setw(width)<<std::left<<"description:"<<text_<<"\n"
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<<std::setw(width)<<std::left<<"description:"<<text_<<"\n"
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<<std::setw(width)<<std::left<<"trigger-time-nt:"<<std::put_time(std::localtime(&tt),"%FT%T")<<"\n"
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<<std::setw(width)<<std::left<<"trigger-time-nt:"<<std::put_time(std::gmtime(&tt),"%FT%T")<<"\n"
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<<std::setw(width)<<std::left<<"trigger-time:"<<std::put_time(std::localtime(&att),"%FT%T")<<"\n"
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<<std::setw(width)<<std::left<<"trigger-time:"<<std::put_time(std::gmtime(&att),"%FT%T")<<"\n"
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<<std::setw(width)<<std::left<<"language-code:"<<language_code_<<"\n"
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<<std::setw(width)<<std::left<<"language-code:"<<language_code_<<"\n"
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<<std::setw(width)<<std::left<<"codepage:"<<codepage_<<"\n"
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<<std::setw(width)<<std::left<<"codepage:"<<codepage_<<"\n"
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<<std::setw(width)<<std::left<<"yname:"<<yname_<<"\n"
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<<std::setw(width)<<std::left<<"yname:"<<yname_<<"\n"
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@@ -451,8 +558,8 @@ namespace imc
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<<"\",\"comment\":\""<<comment_
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<<"\",\"comment\":\""<<comment_
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<<"\",\"origin\":\""<<origin_
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<<"\",\"origin\":\""<<origin_
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<<"\",\"description\":\""<<text_
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<<"\",\"description\":\""<<text_
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<<"\",\"trigger-time-nt\":\""<<std::put_time(std::localtime(&tt),"%FT%T")
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<<"\",\"trigger-time-nt\":\""<<std::put_time(std::gmtime(&tt),"%FT%T")
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<<"\",\"trigger-time\":\""<<std::put_time(std::localtime(&att),"%FT%T")
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<<"\",\"trigger-time\":\""<<std::put_time(std::gmtime(&att),"%FT%T")
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<<"\",\"language-code\":\""<<language_code_
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<<"\",\"language-code\":\""<<language_code_
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<<"\",\"codepage\":\""<<codepage_
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<<"\",\"codepage\":\""<<codepage_
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<<"\",\"yname\":\""<<prepjsonstr(yname_)
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<<"\",\"yname\":\""<<prepjsonstr(yname_)
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@@ -236,13 +236,27 @@ namespace imc
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// provide UUID for channel
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// provide UUID for channel
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chnenv.uuid_ = chnenv.CNuuid_;
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chnenv.uuid_ = chnenv.CNuuid_;
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// for multichannel data there may be multiple channels referring to
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// the same (final) CS block (in contrast to what the IMC software
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// documentation seems to suggest) resulting in all channels missing
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// a CS block except for the very last
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if ( chnenv.CSuuid_.empty() ) {
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for ( imc::block blkCS: rawblocks_ ) {
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if ( blkCS.get_key().name_ == "CS"
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&& blkCS.get_begin() > (unsigned long int)stol(chnenv.uuid_) ) {
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chnenv.CSuuid_ = blkCS.get_uuid();
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}
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}
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}
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// create channel object and add it to the map of channels
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// create channel object and add it to the map of channels
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channels_.insert( std::pair<std::string,imc::channel>
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channels_.insert( std::pair<std::string,imc::channel>
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(chnenv.CNuuid_,imc::channel(chnenv,&mapblocks_,&buffer_))
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(chnenv.CNuuid_,imc::channel(chnenv,&mapblocks_,&buffer_))
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);
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);
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// reset channel uuid
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// reset channel uuid
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chnenv.CNuuid_.clear();
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chnenv.reset();
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//chnenv.CNuuid_.clear();
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}
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}
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}
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}
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@@ -254,7 +268,6 @@ namespace imc
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}
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}
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}
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}
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public:
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public:
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// provide buffer size
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// provide buffer size
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@@ -2,3 +2,4 @@ include lib/*.hpp
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include *.cpp
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include *.cpp
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include *.pyx
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include *.pyx
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include *.pxd
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include *.pxd
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include VERSION
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@@ -1 +1 @@
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2.0.3
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2.0.9
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43
python/examples/multichannel.py
Normal file
43
python/examples/multichannel.py
Normal file
@@ -0,0 +1,43 @@
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import IMCtermite
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import pandas
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import datetime
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def add_trigger_time(trigger_time, add_time) :
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trgts = datetime.datetime.strptime(trigger_time,'%Y-%m-%dT%H:%M:%S')
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dt = datetime.timedelta(seconds=add_time)
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return (trgts + dt).strftime('%Y-%m-%dT%H:%M:%S:%f')
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if __name__ == "__main__" :
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# read file and extract data
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imctm = IMCtermite.imctermite(b"Measurement.raw")
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chns = imctm.get_channels(True)
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# prepare abscissa
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xcol = "time ["+chns[0]['xunit']+"]"
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#xcol = "timestamp"
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xsts = [add_trigger_time(chns[0]['trigger-time'],tm) for tm in chns[0]['xdata']]
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# sort channels
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chnnms = sorted([chn['name'] for chn in chns], reverse=False)
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chnsdict = {}
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for chn in chns :
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chnsdict[chn['name']] = chn
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# construct dataframe
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df = pandas.DataFrame()
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df[xcol] = pandas.Series(chns[0]['xdata'])
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#df[xcol] = pandas.Series(xsts)
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#for idx,chn in enumerate(chns) :
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for chnnm in chnnms :
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chn = chnsdict[chnnm]
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#xcol = (chn['xname'] if chn['xname'] != '' else "x_"+str(idx))+" ["+chn['xunit']+"]"
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#df[xcol] = pandas.Series(chn['xdata'])
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ycol = chn['yname']+" ["+chn['yunit']+"]"
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df[ycol] = pandas.Series(chn['ydata'])
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# show entire dataframe and write file
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print(df)
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df.to_csv("Measurement.csv",header=True,sep='\t',index=False)
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Reference in New Issue
Block a user