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100
.github/workflows/pypi-deploy.yml
vendored
100
.github/workflows/pypi-deploy.yml
vendored
@ -1,100 +0,0 @@
|
||||
|
||||
name: CI Build Wheel
|
||||
|
||||
on:
|
||||
push:
|
||||
tags: ["v[0-9]+.[0-9]+.[0-9]+"]
|
||||
|
||||
jobs:
|
||||
|
||||
build_setup:
|
||||
name: Prepare environment for wheel builds
|
||||
runs-on: ubuntu-24.04
|
||||
steps:
|
||||
- uses: actions/checkout@v2
|
||||
- name: Prepare wheel build
|
||||
run: make -C python/ setup
|
||||
- name: Store wheel configuration files
|
||||
uses: actions/upload-artifact@v4.6.0
|
||||
with:
|
||||
name: wheel-config
|
||||
path: python/
|
||||
- name: Display files
|
||||
run: ls -lR
|
||||
|
||||
build_wheels:
|
||||
name: Build binary wheels on ${{ matrix.os }}
|
||||
runs-on: ${{ matrix.os }}
|
||||
needs: [build_setup]
|
||||
strategy:
|
||||
matrix:
|
||||
os: [ubuntu-latest, windows-latest]
|
||||
|
||||
steps:
|
||||
- uses: actions/checkout@v2
|
||||
- uses: actions/setup-python@v2
|
||||
- name: Install cibuildwheel
|
||||
run: python -m pip install cibuildwheel==2.1.2
|
||||
- name: Get wheel configuration files
|
||||
uses: actions/download-artifact@v4.1.7
|
||||
with:
|
||||
name: wheel-config
|
||||
path: python/
|
||||
- name: Build wheels
|
||||
run: python -m cibuildwheel --output-dir wheelhouse
|
||||
working-directory: python/
|
||||
- name: Store binary wheels
|
||||
uses: actions/upload-artifact@v4.6.0
|
||||
with:
|
||||
name: binary-wheels-${{matrix.os}}-${{ strategy.job-index }}
|
||||
path: python/wheelhouse/*.whl
|
||||
|
||||
build_sdist:
|
||||
name: Build source distribution
|
||||
runs-on: ubuntu-24.04
|
||||
needs: [build_setup]
|
||||
steps:
|
||||
- uses: actions/checkout@v2
|
||||
- name: Install cython
|
||||
run: python -m pip install cython==0.29.24
|
||||
- name: Get wheel configuration files
|
||||
uses: actions/download-artifact@v4.1.7
|
||||
with:
|
||||
name: wheel-config
|
||||
path: python/
|
||||
- name: Build sdist
|
||||
run: python setup.py sdist
|
||||
working-directory: python/
|
||||
- name: Store source wheels
|
||||
uses: actions/upload-artifact@v4.6.0
|
||||
with:
|
||||
name: source-wheels
|
||||
path: python/dist/*.tar.gz
|
||||
- name: Display files
|
||||
run: ls -lR
|
||||
|
||||
|
||||
upload_pypi:
|
||||
name: Upload wheels to PyPI
|
||||
runs-on: ubuntu-24.04
|
||||
needs: [build_wheels, build_sdist]
|
||||
|
||||
steps:
|
||||
- name: Get source wheels
|
||||
uses: actions/download-artifact@v4.1.7
|
||||
with:
|
||||
name: source-wheels
|
||||
path: dist/
|
||||
- name: Get binary wheels
|
||||
uses: actions/download-artifact@v4.1.7
|
||||
with:
|
||||
path: dist/
|
||||
pattern: binary-wheels-*
|
||||
merge-multiple: true
|
||||
- name: Display files
|
||||
run: ls -lR
|
||||
|
||||
- uses: pypa/gh-action-pypi-publish@release/v1
|
||||
with:
|
||||
user: __token__
|
||||
password: ${{ secrets.TDMTERMITE_GITHUB_WORKFLOW_PYPI_API_TOKEN }}
|
||||
24
.gitignore
vendored
24
.gitignore
vendored
@ -6,27 +6,3 @@ build/
|
||||
*.a
|
||||
*.dat
|
||||
data/
|
||||
tdmripper
|
||||
*.csv
|
||||
*.log
|
||||
tdmreaper
|
||||
cython/*.cpp
|
||||
tdmtermite
|
||||
dist/
|
||||
*.egg-info/
|
||||
output/
|
||||
monitor-process.sh
|
||||
tdmtest
|
||||
pip/*.hpp
|
||||
pip/*.md
|
||||
pip/*.cpp
|
||||
pip/*.pyx
|
||||
pip/*.pxd
|
||||
pip/LICENSE
|
||||
|
||||
python/3rdparty/
|
||||
python/LICENSE
|
||||
python/README.md
|
||||
python/TDMtermite.cpp
|
||||
python/lib/
|
||||
|
||||
|
||||
30
Dockerfile
30
Dockerfile
@ -1,30 +0,0 @@
|
||||
|
||||
FROM debian:bullseye
|
||||
|
||||
# install requirements
|
||||
RUN apt-get update && apt-get upgrade -y && apt-get install -y \
|
||||
build-essential \
|
||||
g++ make git \
|
||||
python3 python3-pip
|
||||
|
||||
# check compiler and current user
|
||||
RUN g++ -v && whoami
|
||||
|
||||
# use /home as working directory
|
||||
WORKDIR /home
|
||||
|
||||
# get the public TDMtermite repository
|
||||
RUN git clone https://github.com/RecordEvolution/TDMtermite.git
|
||||
|
||||
# install CLI tool
|
||||
RUN cd ./TDMtermite && ls -lh && make install && ls -lh /usr/local/bin/tdmtermite
|
||||
|
||||
# install Python module
|
||||
RUN cd ./TDMtermite && ls -lh && make cython-requirements && make cython-list && make cython-install
|
||||
|
||||
# create directory for data exchange
|
||||
#RUN [ "/bin/bash", "-c", "mkdir -pv data/{input,output}" ]
|
||||
RUN mkdir -pv data
|
||||
|
||||
CMD ["sleep","infinity"]
|
||||
|
||||
399
README.md
399
README.md
@ -1,350 +1,115 @@
|
||||
# tdm_ripper
|
||||
|
||||
[](https://img.shields.io/github/license/RecordEvolution/TDMtermite)
|
||||
[](https://img.shields.io/github/stars/RecordEvolution/TDMtermite)
|
||||
|
||||
[](https://pypi.org/project/tdmtermite/)
|
||||
The tdm_ripper provides convenient access to the TDM/TDMS data format employed by
|
||||
National Instruments LabView and DIAdem.
|
||||
|
||||
# TDMtermite
|
||||
## Data Format
|
||||
|
||||
_TDMtermite_ is a C++ based library that decodes the proprietary
|
||||
file format _TDM/TDX_ for measurement data. First introduced by
|
||||
[National Instruments](https://www.ni.com), the TDM format relies on the
|
||||
_technical data management_ data model and is employed by
|
||||
[LabVIEW](https://www.ni.com/de-de/shop/labview.html), LabWindows™/CVI™,
|
||||
Measurement Studio, SignalExpress, and [DIAdem](https://www.ni.com/de-de/shop/data-acquisition-and-control/application-software-for-data-acquisition-and-control-category/what-is-diadem.html).
|
||||
|
||||
The [Record Evolution Platform](https://www.record-evolution.de/en/home-en/) uses TDMtermite to integrate measurement data into ETL processes. The TDMtermite library is available both as a command line tool and as a Python module. The Python module of TDMtermite enables data scientists to conveniently include TDM formats in their existing data pipelines by providing access to both raw data and metadata in terms of native Python objects.
|
||||
|
||||
## Overview
|
||||
|
||||
* [TDM file format](#Dataformat)
|
||||
* [Build and Installation](#Installation)
|
||||
* [Usage and Examples](#Usage)
|
||||
* [References](#References)
|
||||
|
||||
## Dataformat
|
||||
|
||||
Datasets encoded in the TDM/TDX format come in pairs comprised of a
|
||||
.tdm (header) file and a .tdx (data) file. While the .tdm file is a human-readable
|
||||
file providing meta information about the dataset, the .tdx file is a binary file
|
||||
containing the actual data. The .tdm based on the _technical data management_
|
||||
model is an XML file. It describes what data the .tdx file contains and how
|
||||
to read it. The
|
||||
[TDM data model](https://www.ni.com/de-de/support/documentation/supplemental/10/ni-tdm-data-model.html)
|
||||
structures the data hierarchically with respect to _file_, _(channel)_ _groups_ and
|
||||
_channels_. The file-level XML may contain any number of (channel) groups, each
|
||||
of which is made up of an arbitrary number of channels. Thus, the XML tree in
|
||||
the [TDM header file](https://zone.ni.com/reference/de-XX/help/370858P-0113/tdmdatamodel/tdmdatamodel/tdm_headerfile/)
|
||||
looks like this:
|
||||
|
||||
```xml
|
||||
<?xml version="1.0" encoding="UTF-8" standalone="no" ?>
|
||||
<usi:tdm xmlns:usi="http://www.ni.com/Schemas/USI/1_0" version="1.0">
|
||||
|
||||
<usi:documentation>
|
||||
<usi:exporter>National Instruments USI</usi:exporter>
|
||||
<usi:exporterVersion>1.5</usi:exporterVersion>
|
||||
</usi:documentation>
|
||||
|
||||
<usi:model modelName="National Instruments USI generated meta file" modelVersion="1.0">
|
||||
<usi:include nsUri="http://www.ni.com/DataModels/USI/TDM/1_0"/>
|
||||
</usi:model>
|
||||
|
||||
<usi:include>
|
||||
<file byteOrder="littleEndian" url="example.tdx">
|
||||
...
|
||||
<block byteOffset="0" id="inc0" length="1000" valueType="eFloat64Usi"/>
|
||||
...
|
||||
<block_bm id="inc4" blockOffset="100" blockSize="7" byteOffset="0" length="4" valueType="eInt8Usi"/>
|
||||
...
|
||||
</usi:include>
|
||||
|
||||
<usi:data>
|
||||
...
|
||||
</usi:data>
|
||||
|
||||
</usi:tdm>
|
||||
```
|
||||
|
||||
The XML tree is comprised of _four_ main XML elements: `usi:documentation`, `usi:model`,
|
||||
`usi:include` and `usi:data`. The element `usi:include` references the data file
|
||||
`example.tdx` and reveals one of _two_ possible orderings of the mass data (.tdx):
|
||||
|
||||
1. either _channel-wise_ (`<block>`) - all values of a specific channel follow subsequently
|
||||
1. or _block-wise_ (`<block_bm>`) - all values of a specific measurement time follow subsequently.
|
||||
|
||||
The supported _numerical data types_ are:
|
||||
|
||||
| datatype | channel datatype | numeric | value sequence | size | description |
|
||||
|-------------|------------------|---------|-----------------|-------|-------------------------|
|
||||
| eInt16Usi | DT_SHORT | 2 | short_sequence | 2byte | signed 16 bit integer |
|
||||
| eInt32Usi | DT_LONG | 6 | long_sequence | 4byte | signed 32 bit integer |
|
||||
| eUInt8Usi | DT_BYTE | 5 | byte_sequence | 1byte | unsigned 8 bit integer |
|
||||
| eUInt16Usi | DT_SHORT | 2 | short_sequence | 2byte | unsigned 16 bit integer |
|
||||
| eUInt32Usi | DT_LONG | 6 | long_sequence | 4byte | unsigned 32 bit integer |
|
||||
| eFloat32Usi | DT_FLOAT | 3 | float_sequence | 4byte | 32 bit float |
|
||||
| eFloat64Usi | DT_DOUBLE | 7 | double_sequence | 8byte | 64 Bit double |
|
||||
| eStringUsi | DT_STRING | 1 | string_sequence | | text |
|
||||
|
||||
The XML element `<usi:data>` is comprised of _five_ different types of
|
||||
elements that are `<tdm_root>`, `<tdm_channelgroup>`, `<tdm_channel>`, `<localcolumn>`
|
||||
and `<submatrix>`. The root element `<tdm_root>` describes the general properties
|
||||
of the dataset and lists the _ids_ of all channel groups that belong to
|
||||
the dataset. The element `<tdm_channelgroup>` divides the _channels_ into groups
|
||||
and has a unique _id_ that is referenced by its root element. The `<channels>`
|
||||
element in `<tdm_channelgroup>` lists the unique ids of all channels that belong
|
||||
to that group. Finally, the element `<tdm_channel>` describes a single column of
|
||||
actual data including its datatype. The remaining element types are
|
||||
`<localcolumn>`
|
||||
|
||||
```xml
|
||||
<localcolumn id="usiXY">
|
||||
<name>Untitled</name>
|
||||
<measurement_quantity>#xpointer(id("usiAB"))</measurement_quantity>
|
||||
<submatrix>#xpointer(id("usiMN"))</submatrix>
|
||||
<global_flag>15</global_flag>
|
||||
<independent>0</independent>
|
||||
<sequence_representation> ... </sequence_representation>
|
||||
<values>#xpointer(id("usiZ"))</values>
|
||||
</localcolumn>
|
||||
```
|
||||
|
||||
with a unique id, the `<measurement_quantity>` referring to one specific channel,
|
||||
the `<submatrix>` and its id respectively, the type of representation in
|
||||
`<sequence_representation>` - being one of _explicit_, _implicit linear_ or
|
||||
_rawlinear_ - and the `<values>` element, which refers to one _value sequence_,
|
||||
and the element `<submatrix>`
|
||||
|
||||
```xml
|
||||
<submatrix id="usiXX">
|
||||
<name>Untitled</name>
|
||||
<measurement>#xpointer(id("usiUV"))</measurement>
|
||||
<number_of_rows>N</number_of_rows>
|
||||
<local_columns>#xpointer(id("usiMN"))</local_columns>
|
||||
</submatrix>
|
||||
```
|
||||
|
||||
that references the channel group in `<measurement>` to which it belongs and provides
|
||||
the _number of rows_ in the channels listed in `<local_columns>`.
|
||||
Datasets encoded in the TDM/TDMS format come along in pairs comprised of a
|
||||
.tdm and .tdx file. While the .tdm file is a human-readable document providing
|
||||
meta information about the dataset, the .tdx is a binary containing the actual data.
|
||||
The .tdm is represented in XML format and basically reveals what data the .tdx
|
||||
contains and how to read it. The XML tree is usually made up of several groups,
|
||||
each containing an arbitrary amount of channels.
|
||||
|
||||
## Installation
|
||||
|
||||
The library can be used both as a _CLI_-based tool and as a _Python_ module.
|
||||
|
||||
### CLI tool
|
||||
|
||||
To install the CLI tool _TDMtermite_, do
|
||||
The makefile provides targets for using the library both as native C++ extension
|
||||
and as Python module. The package supports usage on Linux and MacOSX.
|
||||
The tdm_ripper module is built on these platforms by
|
||||
|
||||
```Shell
|
||||
# Linux
|
||||
pip install Cython
|
||||
make install
|
||||
```
|
||||
|
||||
which uses `/usr/local/bin` as an installation directory. On _macOSX_, please first
|
||||
build the binary locally with `make` and install it in your preferred location.
|
||||
|
||||
### Python
|
||||
|
||||
In order to build a _Python module_ from the _C++_ code base, the
|
||||
[Cython](https://cython.readthedocs.io/en/latest/index.html) package must be
|
||||
available. It may be installed via `python3 -m pip install cython` .
|
||||
The [Numpy](https://numpy.org) package is recommended
|
||||
to pass arrays of data from the C++ kernel to Python. The _makefile_ provides
|
||||
the target `make cython-requirements` to install all required Python modules.
|
||||
Finally, to build the Python extension _tdm_termite_ locally or install
|
||||
it, the targets `make cython-build` and `make cython-install` are provided.
|
||||
To install the Python module on the system, simply do
|
||||
and
|
||||
|
||||
```Shell
|
||||
make cython-requirements
|
||||
make cython-install
|
||||
# macOS
|
||||
pip install Cython
|
||||
make install_osx
|
||||
```
|
||||
|
||||
which makes the module available for import by `import tdm_termite` .
|
||||
|
||||
#### Installation with pip
|
||||
|
||||
The package is also available via the [Python Package Index](https://pypi.org) at
|
||||
[TDMtermite](https://pypi.org/project/tdmtermite/). To install the latest version simply do
|
||||
|
||||
```Shell
|
||||
python3 -m pip install tdmtermite
|
||||
```
|
||||
|
||||
##### Unix
|
||||
|
||||
Note, that _python3_setuptools_ and _gcc version >= 10.2.0_ are required to
|
||||
successfully install and use it.
|
||||
|
||||
## Usage
|
||||
|
||||
### CLI tool
|
||||
Although the package is built upon a C++ core, which decodes the data, it may be
|
||||
used as a Python module, as well, by interfacing the C++ library with a Cython
|
||||
wrapper.
|
||||
|
||||
The usage of the CLI tool is sufficiently clarified by its help message displayed
|
||||
by `tdmtermite --help`. To extract the data decoded in the pair of
|
||||
files `samples/SineData.tdm` and `samples/SineData.tdx` into the directory
|
||||
`/home/jack/data/`:
|
||||
### C++ core
|
||||
|
||||
```Shell
|
||||
tdmtermite samples/SineData.tdm samples/SineData.tdx --output /home/jack/data
|
||||
```
|
||||
- In order to parse the XML tree of the .tdm file, the library employs pugixml:
|
||||
https://pugixml.org/ and https://github.com/zeux/pugixml
|
||||
- The package currently supports the following datatypes:
|
||||
- eInt8Usi: 8 byte
|
||||
- eInt16Usi: 16 byte
|
||||
- eInt32Usi: 32 byte
|
||||
- eInt64Usi: 64 byte
|
||||
- eUInt8Usi: 8 byte
|
||||
- eUInt16Usi: 16 byte
|
||||
- eUInt32Usi: 32 byte
|
||||
- eUInt64Usi: 64 byte
|
||||
- eFloat32Usi: 32 byte
|
||||
- eFloat64Usi: 64 byte
|
||||
- The core of the library takes care of the decoding by reinterpretation of the
|
||||
binary in the buffer as the required datatype implemented by
|
||||
|
||||
The tool can also be used to list the available objects in the TDM dataset, which
|
||||
are i.a. _channels_, _channelgroups_ and TDX _blocks_. To list
|
||||
all channels and channelgroups (without writing any file output):
|
||||
```C++
|
||||
uint8_t *dfcast = reinterpret_cast<uint8_t*>(&df);
|
||||
|
||||
```Shell
|
||||
tdmtermite samples/SineData.tdm samples/SineData.tdx --listgroups --listchannels
|
||||
```
|
||||
for ( int i = 0; i < (int)sizeof(double); i++ )
|
||||
{
|
||||
dfcast[i] = (int)bych[i];
|
||||
}
|
||||
```
|
||||
|
||||
The user may also submit a _filenaming rule_ to control the names of the files the
|
||||
channel(group)s are written to. To this end, the _magic flags_ `%G` `%g`, `%C`
|
||||
and `%c` representing the group id, group name, channel index and channel name
|
||||
are defined. The default filenaming option is:
|
||||
where for instance df is the resulting float and bych contains the binary
|
||||
data as an array of chars.
|
||||
- main.cpp contains an example of how the C++ library might be used to provide
|
||||
the channels and groups of the dataset. It is simply build by
|
||||
|
||||
```Shell
|
||||
tdmtermite samples/SineData.tdm samples/SineData.tdx --output /home/jack/data --filenames channelgroup_%G.csv
|
||||
```
|
||||
```Shell
|
||||
make
|
||||
```
|
||||
|
||||
This makes the tool write _all channels_ grouped into files according to their
|
||||
group association, while all channelgroup filenames obey the pattern `channelgroup_%G.csv`,
|
||||
with `%G` being replaced by the group id. The filenaming rule also enables the user
|
||||
to extract only a single channel(group) by providing a particular channel(group)
|
||||
id in the filenaming flag. For example,
|
||||
- extract_all.cpp takes the .tdm, the .tdx file and some output directory as arguments
|
||||
to provide all given information in .csv format without any logging. To build:
|
||||
|
||||
```Shell
|
||||
tdmtermite samples/SineData.tdm samples/SineData.tdx --output /home/jack/data -f channel_usi16_%c.csv --includemeta
|
||||
```
|
||||
```Shell
|
||||
make extall
|
||||
```
|
||||
|
||||
This will write the single channel with the id `usi16` to the file
|
||||
`/home/jack/data/channel_usi16_A4.csv`, including its meta-data as a file header.
|
||||
For instance, the executable accepts the following arguments:
|
||||
|
||||
### Python
|
||||
```Shell
|
||||
./extract_all samples/SineData.tdm samples/SineData.tdx data/
|
||||
```
|
||||
|
||||
To be able to use the Python module _tdm_termite_, it first has to be built locally
|
||||
or installed on the system. In the Python interpreter, simply do:
|
||||
### Python module
|
||||
|
||||
```Python
|
||||
import tdmtermite
|
||||
```
|
||||
- The library may also be used as a Python module and supports the use of
|
||||
group channels in NumPy arrays as shown in example.py .
|
||||
- To extract all available information and data in the TDM files without any
|
||||
further interaction, the use of extract_all.py is recommended. To exhibit the
|
||||
required arguments:
|
||||
|
||||
This will import the module. The TDM files are provided by creating an instance of
|
||||
the _tdmtermite_ class:
|
||||
```Shell
|
||||
python extract_all.py --help
|
||||
```
|
||||
- The same functionality may be obtained from an existing python script by
|
||||
importing the tdm_ripper module and calling the extract_all function. For
|
||||
instance
|
||||
|
||||
```Python
|
||||
# create 'tdmtermite' instance object
|
||||
try :
|
||||
jack = tdmtermite.tdmtermite(b'samples/SineData.tdm',b'samples/SineData.tdx')
|
||||
except RuntimeError as e:
|
||||
print("failed to load/decode TDM files: " + str(e))
|
||||
```
|
||||
```Python
|
||||
import tdm_ripper as td
|
||||
|
||||
After initializing the _tdmtermite_ object, it can be used to extract any of the
|
||||
available data. For instance, to list the included channelgroups and channels:
|
||||
files = td.extract_all(b"samples/SineData.tdm",b"samples/SineData.tdx",b"data/",b"my_tdm")
|
||||
```
|
||||
|
||||
```Python
|
||||
# list ids of channelgroups
|
||||
grpids = jack.get_channelgroup_ids()
|
||||
|
||||
|
||||
# list ids of channels
|
||||
chnids = jack.get_channel_ids()
|
||||
```
|
||||
|
||||
As a use case, we have a look at listing the ids of all channelgroups and printing
|
||||
their data to separate files:
|
||||
|
||||
```Python
|
||||
import tdmtermite
|
||||
import re
|
||||
|
||||
# create 'tdmtermite' instance object
|
||||
try :
|
||||
jack = tdmtermite.tdmtermite(b'samples/SineData.tdm',b'samples/SineData.tdx')
|
||||
except RuntimeError as e :
|
||||
print("failed to load/decode TDM files: " + str(e))
|
||||
|
||||
# list ids of channelgroups
|
||||
grpids = jack.get_channelgroup_ids()
|
||||
grpids = [x.decode() for x in grpids]
|
||||
print("list of channelgroups: ",grpids)
|
||||
|
||||
for grp in grpids :
|
||||
|
||||
# obtain meta data of channelgroups
|
||||
grpinfo = jack.get_channelgroup_info(grp.encode())
|
||||
print( json.dumps(grpinfo,sort_keys=False,indent=4) )
|
||||
|
||||
# write this channelgroup to file
|
||||
try :
|
||||
grpname = re.sub('[^A-Za-z0-9]','',grpinfo['name'])
|
||||
grpfile = "channelgroup_" + str(grp) + "_" + str(grpname) + ".csv"
|
||||
jack.print_channelgroup(grp.encode(), # id of group to be printed
|
||||
grpfile.encode(), # filename
|
||||
True, # include metadata as fileheader
|
||||
ord(' ') # delimiter char
|
||||
)
|
||||
except RuntimeError as e :
|
||||
print("failed to print channelgroup: " + str(grp) + " : " + str(e))
|
||||
```
|
||||
|
||||
For details, see this [extensive example](python/usage.py)
|
||||
and the absolute minimal example [minimal usage](python/minimal.py). In order
|
||||
to simply extract all data of the TDM datatset and dump it to files in a given
|
||||
(existing!) directory, do
|
||||
|
||||
```Python
|
||||
import tdmtermite
|
||||
jack = tdmtermite.tdmtermite(b'samples/SineData.tdm',b'samples/SineData.tdx')
|
||||
jack.write_all(b"./my_tdm_data_directory/")
|
||||
```
|
||||
|
||||
The interface allows you to construct customized file/column headers from any
|
||||
meta-data and provide these headers for usage in file output (see this
|
||||
[example](python/custom.py)).
|
||||
|
||||
## References
|
||||
|
||||
### TDM
|
||||
|
||||
- https://www.ni.com/de-de/support/documentation/supplemental/10/ni-tdm-data-model.html
|
||||
- https://zone.ni.com/reference/en-XX/help/371361R-01/lvconcepts/fileio_tdms_model/
|
||||
- https://zone.ni.com/reference/en-XX/help/371361R-01/lvhowto/ni_test_data_exchange/
|
||||
- https://www.ni.com/de-de/support/documentation/supplemental/06/the-ni-tdms-file-format.html
|
||||
- https://zone.ni.com/reference/de-XX/help/370858P-0113/tdmdatamodel/tdmdatamodel/tdm_headerfile/
|
||||
- https://www.ni.com/content/dam/web/product-documentation/c_dll_tdm.zip
|
||||
|
||||
### IEEE Standard and datatypes
|
||||
|
||||
- https://en.wikipedia.org/wiki/IEEE_754
|
||||
- https://www.ias.ac.in/public/Volumes/reso/021/01/0011-0030.pdf
|
||||
- https://en.cppreference.com/w/cpp/language/types
|
||||
|
||||
### Implementation
|
||||
|
||||
- https://en.cppreference.com/w/
|
||||
- https://pugixml.org/
|
||||
- https://github.com/zeux/pugixml
|
||||
- https://cython.readthedocs.io/en/latest/src/userguide/wrapping_CPlusPlus.html
|
||||
|
||||
### Packaging
|
||||
|
||||
#### Documentation
|
||||
|
||||
- https://packaging.python.org/tutorials/packaging-projects/
|
||||
- https://setuptools.readthedocs.io/en/latest/userguide/declarative_config.html
|
||||
- https://test.pypi.org/account/register/
|
||||
- https://github.com/pypa/auditwheel
|
||||
- https://github.com/pypa/python-manylinux-demo
|
||||
- https://github.com/pypa/manylinux
|
||||
|
||||
#### C/C++ Extensions
|
||||
|
||||
- https://docs.python.org/3/extending/building.html
|
||||
|
||||
#### Articles
|
||||
|
||||
- https://martinsosic.com/development/2016/02/08/wrapping-c-library-as-python-module.html
|
||||
- https://malramsay.com/post/perils-of-packaging/
|
||||
- https://github.com/neuronsimulator/nrn/issues/329
|
||||
- https://levelup.gitconnected.com/how-to-deploy-a-cython-package-to-pypi-8217a6581f09
|
||||
- https://medium.com/swlh/distributing-python-packages-protected-with-cython-40fc29d84caf
|
||||
where the arguments "data/" and "my_tdm" are optional. "data/" specifies the
|
||||
directory where all .csv output is dumped while "my_tdm" represents a name
|
||||
prefix for all csv. files.
|
||||
Note, that all string arguments must be converted to bytes before passing to
|
||||
the argument list by prepending "b".
|
||||
|
||||
@ -1,55 +0,0 @@
|
||||
|
||||
<html>
|
||||
|
||||
<head>
|
||||
|
||||
<title>TDMtermite</title>
|
||||
<style>
|
||||
</style>
|
||||
|
||||
</head>
|
||||
|
||||
<body>
|
||||
|
||||
<p align="center">
|
||||
<a href="https://github.com/RecordEvolution/TDMtermite.git">
|
||||
<img alt="tdmtermite.svg"
|
||||
src="assets/tdmtermite.svg"
|
||||
width="400"
|
||||
/>
|
||||
</a>
|
||||
</p>
|
||||
|
||||
<div style="width: 100%; display: block; margin-left: 28%; margin-right: 28%;">
|
||||
|
||||
<div style="width: 100%; overflow: hidden;">
|
||||
|
||||
<div style="margin: 5px; float: left;">
|
||||
<a href="https://lgtm.com/projects/g/RecordEvolution/TDMtermite/alerts/">
|
||||
<img alt="Total alerts"
|
||||
src="https://img.shields.io/lgtm/alerts/g/RecordEvolution/TDMtermite.svg?logo=lgtm&logoWidth=18"/>
|
||||
</a>
|
||||
</div>
|
||||
|
||||
<div style="margin: 5px; float: left;">
|
||||
<a href="https://lgtm.com/projects/g/RecordEvolution/TDMtermite/context:cpp">
|
||||
<img alt="Language grade: C/C++"
|
||||
src="https://img.shields.io/lgtm/grade/cpp/g/RecordEvolution/TDMtermite.svg?logo=lgtm&logoWidth=18"/>
|
||||
</a>
|
||||
</div>
|
||||
|
||||
<div style="margin: 5px; float: left;">
|
||||
<a href="https://lgtm.com/projects/g/RecordEvolution/TDMtermite/context:python">
|
||||
<img alt="Language grade: Python"
|
||||
src="https://img.shields.io/lgtm/grade/python/g/RecordEvolution/TDMtermite.svg?logo=lgtm&logoWidth=18"/>
|
||||
</a>
|
||||
</div>
|
||||
|
||||
</div>
|
||||
|
||||
</div>
|
||||
|
||||
</body>
|
||||
|
||||
</html>
|
||||
|
||||
@ -1,60 +0,0 @@
|
||||
<?xml version="1.0" encoding="UTF-8"?>
|
||||
<svg xmlns="http://www.w3.org/2000/svg"
|
||||
xmlns:xlink="http://www.w3.org/1999/xlink"
|
||||
version="1.1" baseProfile="full"
|
||||
width="1200px" height="800px"
|
||||
viewBox="0 0 1200 800">
|
||||
<title>TDM data model</title>
|
||||
<desc>Graphical respresentation of the TDM data model</desc>
|
||||
|
||||
<style>
|
||||
.rered {
|
||||
fill: #e62828;
|
||||
}
|
||||
.reblue {
|
||||
fill: #334d5c;
|
||||
}
|
||||
.rebrown {
|
||||
fill: #c7ae7f;
|
||||
}
|
||||
.regreen {
|
||||
fill: #49a078;
|
||||
}
|
||||
.reorange {
|
||||
fill: #f9ae1e;
|
||||
}
|
||||
.regunmetal {
|
||||
fill: #233543;
|
||||
}
|
||||
.relightgrey {
|
||||
fill: #98a6ac;
|
||||
}
|
||||
|
||||
.header {
|
||||
font-family:sans-serif;
|
||||
font-size: 26px;
|
||||
font-weight: normal;
|
||||
fill: #33bb78;
|
||||
stroke: #33bb78;
|
||||
stroke-width: 1;
|
||||
}
|
||||
|
||||
</style>
|
||||
|
||||
<!-- tdm_root -->
|
||||
<rect x="400" y="200" width="400" height="100" fill="white" stroke="black"/>
|
||||
<text class="header" id="tdmroot" x="600" y="240">tdm_root</text>
|
||||
|
||||
<!-- <path d="M 174.5,126.0 L 175.0,127.5 173.5,128.0 174.5,126.0 Z M 100,100 C 100,200 200,100 200,200 Q 50,150,100,100 L 200,100 z" /> -->
|
||||
|
||||
<!-- <line x1="0" y1="200" x2="700" y2="200" stroke="black" stroke-width="20px"/> -->
|
||||
<!-- Das Rechteck -->
|
||||
<!-- <rect x="100" y="100" width="500" height="200" fill="white" stroke="black" stroke-width="20px"/> -->
|
||||
<!-- Der Schleifer -->
|
||||
<!-- <line x1="180" y1="370" x2="500" y2="50" stroke="black" stroke-width="15px"/> -->
|
||||
<!-- Die Pfeilspitze -->
|
||||
<!-- <polygon points="585 0 525 25 585 50" transform="rotate(135 525 25)" stroke="black" stroke-width="4px" fill="blue"/> -->
|
||||
|
||||
<!-- <circle class="reblue" cx="50" cy="50" r="40" stroke="black"/> -->
|
||||
|
||||
</svg>
|
||||
|
Before Width: | Height: | Size: 1.6 KiB |
@ -1,80 +0,0 @@
|
||||
<?xml version="1.0" encoding="UTF-8" standalone="no"?>
|
||||
<svg
|
||||
xmlns:dc="http://purl.org/dc/elements/1.1/"
|
||||
xmlns:cc="http://creativecommons.org/ns#"
|
||||
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
|
||||
xmlns:svg="http://www.w3.org/2000/svg"
|
||||
xmlns="http://www.w3.org/2000/svg"
|
||||
viewBox="0 0 347.72 77.08"
|
||||
version="1.1"
|
||||
id="svg3945"
|
||||
width="347.72"
|
||||
height="77.080002">
|
||||
<metadata
|
||||
id="metadata3951">
|
||||
<rdf:RDF>
|
||||
<cc:Work
|
||||
rdf:about="">
|
||||
<dc:format>image/svg+xml</dc:format>
|
||||
<dc:type
|
||||
rdf:resource="http://purl.org/dc/dcmitype/StillImage" />
|
||||
<dc:title>flasher</dc:title>
|
||||
</cc:Work>
|
||||
</rdf:RDF>
|
||||
</metadata>
|
||||
<defs
|
||||
id="defs3949" />
|
||||
<title
|
||||
id="title3916">flasher</title>
|
||||
<g
|
||||
id="logog">
|
||||
<path
|
||||
id="path138"
|
||||
d="m 32.86,2 -13,7.5 v 0 h -0.05 v 0 l -0.48,0.28 c -4.27,2.46 -5.68,11.38 -6.06,14.75 L 36.2,11.33 c 0.39,-0.19 7.6,-3.69 13.57,-3.69 h 0.14 L 40.13,2 a 8.15,8.15 0 0 0 -7.27,0"
|
||||
transform="translate(-2.04,-1.15)"
|
||||
style="fill:#364d5c" />
|
||||
<path
|
||||
id="path142"
|
||||
d="M 5.68,17.69 A 8.2,8.2 0 0 0 2,24 v 15.78 c 0,4.9 7,10.48 9.75,12.46 V 25.77 c 0,-0.44 0.6,-8.55 3.65,-13.72 z"
|
||||
transform="translate(-2.04,-1.15)"
|
||||
style="fill:#364d5c" />
|
||||
<path
|
||||
id="path146"
|
||||
d="m 12.1,54.12 v 0 C 11.74,53.88 5,49.41 2,44.24 v 11.14 a 8.2,8.2 0 0 0 3.64,6.3 l 13.5,7.79 c 4.28,2.46 12.7,-0.77 15.81,-2.12 z"
|
||||
transform="translate(-2.04,-1.15)"
|
||||
style="fill:#364d5c" />
|
||||
<path
|
||||
id="path150"
|
||||
d="m 36.79,68 c -0.4,0.19 -7.71,3.75 -13.71,3.69 l 9.78,5.64 a 8.15,8.15 0 0 0 7.27,0 l 13.51,-7.8 c 4.27,-2.46 5.68,-11.39 6.06,-14.75 z"
|
||||
transform="translate(-2.04,-1.15)"
|
||||
style="fill:#364d5c" />
|
||||
<path
|
||||
id="path154"
|
||||
d="M 61.2,27.13 V 53.6 c 0,0.44 -0.6,8.55 -3.65,13.72 l 9.77,-5.64 A 8.2,8.2 0 0 0 71,55.38 V 39.59 c 0,-4.94 -7,-10.5 -9.75,-12.46"
|
||||
transform="translate(-2.04,-1.15)"
|
||||
style="fill:#364d5c" />
|
||||
<path
|
||||
id="path158"
|
||||
d="M 67.31,17.69 53.81,9.9 C 49.53,7.44 41.11,10.67 38,12 l 22.85,13.23 v 0 a 43.43,43.43 0 0 1 5.7,4.51 24,24 0 0 1 4.45,5.35 V 24 a 8.2,8.2 0 0 0 -3.64,-6.3"
|
||||
transform="translate(-2.04,-1.15)"
|
||||
style="fill:#364d5c" />
|
||||
</g>
|
||||
<g
|
||||
id="re" />
|
||||
<text
|
||||
xml:space="preserve"
|
||||
style="font-style:normal;font-weight:normal;font-size:40px;line-height:1.25;font-family:sans-serif;letter-spacing:0px;word-spacing:0px;fill:#364d5c;fill-opacity:1;stroke:none"
|
||||
x="74.101189"
|
||||
y="54.47554"
|
||||
id="text3955"><tspan
|
||||
id="tspan3953"
|
||||
x="74.101189"
|
||||
y="54.47554"
|
||||
style="font-style:normal;font-variant:normal;font-weight:bold;font-stretch:normal;font-size:44px;font-family:sans-serif;-inkscape-font-specification:'sans-serif, Bold';font-variant-ligatures:normal;font-variant-caps:normal;font-variant-numeric:normal;font-feature-settings:normal;text-align:start;writing-mode:lr-tb;text-anchor:start;fill:#364d5c;fill-opacity:1"><tspan
|
||||
style="font-style:normal;font-variant:normal;font-weight:bold;font-stretch:normal;font-family:sans-serif;-inkscape-font-specification:'sans-serif Bold'"
|
||||
id="tspan86">TDM</tspan><tspan
|
||||
style="font-style:normal;font-variant:normal;font-weight:normal;font-stretch:normal;font-family:sans-serif;-inkscape-font-specification:sans-serif"
|
||||
id="tspan3845"><tspan
|
||||
style="font-style:normal;font-variant:normal;font-weight:bold;font-stretch:normal;font-family:sans-serif;-inkscape-font-specification:'sans-serif Bold'"
|
||||
id="tspan150">RE</tspan>aper</tspan> </tspan></text>
|
||||
</svg>
|
||||
|
Before Width: | Height: | Size: 3.6 KiB |
@ -1,78 +0,0 @@
|
||||
<?xml version="1.0" encoding="UTF-8" standalone="no"?>
|
||||
<svg
|
||||
xmlns:dc="http://purl.org/dc/elements/1.1/"
|
||||
xmlns:cc="http://creativecommons.org/ns#"
|
||||
xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#"
|
||||
xmlns:svg="http://www.w3.org/2000/svg"
|
||||
xmlns="http://www.w3.org/2000/svg"
|
||||
viewBox="0 0 328.72 77.08"
|
||||
version="1.1"
|
||||
id="svg3945"
|
||||
width="328.72"
|
||||
height="77.080002">
|
||||
<metadata
|
||||
id="metadata3951">
|
||||
<rdf:RDF>
|
||||
<cc:Work
|
||||
rdf:about="">
|
||||
<dc:format>image/svg+xml</dc:format>
|
||||
<dc:type
|
||||
rdf:resource="http://purl.org/dc/dcmitype/StillImage" />
|
||||
<dc:title>flasher</dc:title>
|
||||
</cc:Work>
|
||||
</rdf:RDF>
|
||||
</metadata>
|
||||
<defs
|
||||
id="defs3949" />
|
||||
<title
|
||||
id="title3916">flasher</title>
|
||||
<g
|
||||
id="logog">
|
||||
<path
|
||||
id="path138"
|
||||
d="m 32.86,2 -13,7.5 v 0 h -0.05 v 0 l -0.48,0.28 c -4.27,2.46 -5.68,11.38 -6.06,14.75 L 36.2,11.33 c 0.39,-0.19 7.6,-3.69 13.57,-3.69 h 0.14 L 40.13,2 a 8.15,8.15 0 0 0 -7.27,0"
|
||||
transform="translate(-2.04,-1.15)"
|
||||
style="fill:#364d5c" />
|
||||
<path
|
||||
id="path142"
|
||||
d="M 5.68,17.69 A 8.2,8.2 0 0 0 2,24 v 15.78 c 0,4.9 7,10.48 9.75,12.46 V 25.77 c 0,-0.44 0.6,-8.55 3.65,-13.72 z"
|
||||
transform="translate(-2.04,-1.15)"
|
||||
style="fill:#364d5c" />
|
||||
<path
|
||||
id="path146"
|
||||
d="m 12.1,54.12 v 0 C 11.74,53.88 5,49.41 2,44.24 v 11.14 a 8.2,8.2 0 0 0 3.64,6.3 l 13.5,7.79 c 4.28,2.46 12.7,-0.77 15.81,-2.12 z"
|
||||
transform="translate(-2.04,-1.15)"
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56
example.py
Normal file
56
example.py
Normal file
@ -0,0 +1,56 @@
|
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import tdm_ripper
|
||||
import numpy as np
|
||||
import matplotlib.pyplot as plt
|
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|
||||
tdmpatha = b"samples/SineData.tdm"
|
||||
tdxpatha = b"samples/SineData.tdx"
|
||||
tdmpathb = b"/Users/mariofink/Downloads/CONTI_HBS_samples/config_id_1/001_Test_DIAdem/Messung.tdm"
|
||||
tdxpathb = b"/Users/mariofink/Downloads/CONTI_HBS_samples/config_id_1/001_Test_DIAdem/Messung.tdx"
|
||||
|
||||
tdmpathchz = tdmpathb
|
||||
tdxpathchz = tdxpathb
|
||||
|
||||
# create instance of ripper class
|
||||
# RP = tdm_ripper.pytdmripper(tdmpath)
|
||||
RP = tdm_ripper.pytdmripper(tdmpathchz,tdxpathchz)
|
||||
|
||||
# provide overview of available channels
|
||||
RP.show_channels()
|
||||
|
||||
print(RP.num_channels())
|
||||
print(RP.num_groups())
|
||||
|
||||
for i in range(0,RP.num_groups()):
|
||||
print(str(i+1).rjust(10)+str(RP.no_channels(i)).rjust(10))
|
||||
|
||||
# print particular channel to file
|
||||
RP.print_channel(1,b"SineData_extract.dat")
|
||||
|
||||
# show some meta information
|
||||
print(RP.meta_info(b"SMP_Name").decode('utf-8'))
|
||||
print(RP.meta_info(b"Location").decode('utf-8'))
|
||||
print('\n')
|
||||
|
||||
RP.print_meta(b"meta_information.dat")
|
||||
|
||||
# extract channel and return it to numpy array
|
||||
# channels = RP.get_channel(1)
|
||||
# Nlen = len(channels)
|
||||
# channels = np.append(channels,RP.get_channel(2))
|
||||
# channels = np.append(channels,RP.get_channel(3))
|
||||
# channels = np.append(channels,RP.get_channel(4))
|
||||
# channels = np.append(channels,RP.get_channel(5))
|
||||
# channels = np.append(channels,RP.get_channel(6))
|
||||
# channels = np.append(channels,RP.get_channel(7))
|
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# channels = np.append(channels,RP.get_channel(8))
|
||||
# print(channels.shape)
|
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# print("\n\n")
|
||||
# print(channels[0:40])
|
||||
#
|
||||
# x = np.linspace(0,Nlen,Nlen)
|
||||
# plt.plot(x,channels[0:Nlen])
|
||||
# plt.plot(x,channels[Nlen:2*Nlen])
|
||||
# plt.plot(x,channels[2*Nlen:3*Nlen])
|
||||
#
|
||||
# plt.grid()
|
||||
# plt.show()
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62
extract_all.py
Normal file
62
extract_all.py
Normal file
@ -0,0 +1,62 @@
|
||||
import tdm_ripper
|
||||
import numpy as np
|
||||
import argparse
|
||||
import re
|
||||
|
||||
parser = argparse.ArgumentParser(description='provide path of both .tdm and corresponding .tdx file')
|
||||
parser.add_argument('tdm_file',type=str,help='path of .tdm file')
|
||||
parser.add_argument('tdx_file',type=str,help='path of .tdx file')
|
||||
#parser.add_argument('--tdx_file',type=str,help='path of .tdx file',default='')
|
||||
parser.add_argument('--out_directory',type=str,help='choose directory where to write data',default='./')
|
||||
parser.add_argument('--prefix_name',type=str,help='provide dataset name used as filename prefix',default='')
|
||||
args = parser.parse_args()
|
||||
#print(args)
|
||||
|
||||
# process arguments
|
||||
tdmpath = args.tdm_file #"samples/SineData.tdm"
|
||||
tdxpath = args.tdx_file #"samples/SineData.tdx"
|
||||
outdirx = args.out_directory
|
||||
fprefix = args.prefix_name
|
||||
|
||||
# if no prefix is given, .tdm filename will be used
|
||||
if fprefix == '' :
|
||||
fprefix = tdmpath.rstrip('.tdm').split('/')[-1]
|
||||
# TODO better use os.path !!
|
||||
|
||||
#print(fprefix)
|
||||
|
||||
# create instance of ripper class
|
||||
RP = tdm_ripper.pytdmripper(tdmpath.encode('utf-8'),tdxpath.encode('utf-8'))
|
||||
|
||||
# provide overview over available groups and channels
|
||||
#RP.show_groups()
|
||||
#RP.show_channels()
|
||||
|
||||
# obtain number of available groups and channels
|
||||
numgr = RP.num_groups()
|
||||
numch = RP.num_channels()
|
||||
|
||||
# dump all meta information
|
||||
RP.print_meta((outdirx+fprefix+'.csv').encode('utf-8'))
|
||||
|
||||
# dump all available groups and channels
|
||||
for g in range(0,numgr):
|
||||
numgrch = RP.no_channels(g)
|
||||
for c in range(0,numgrch):
|
||||
#print(str(g).rjust(10)+str(c).rjust(10))
|
||||
# print(str(RP.channel_length(g,c)))
|
||||
# print(RP.channel_name(g,c))
|
||||
#print(RP.channel(g,c))
|
||||
# obtained overall channel id
|
||||
chid = RP.obtain_channel_id(g,c)
|
||||
# get group's and channel's name
|
||||
gname = RP.group_name(g)
|
||||
cname = RP.channel_name(g,c)
|
||||
#print(gname.rjust(30)+cname.rjust(30))
|
||||
# use regular expression replacement to sanitize group and channel names
|
||||
gname = re.sub('[!@#$%^&*()-+= ,]','',gname)
|
||||
cname = re.sub('[!@#$%^&*()-+= ,]','',cname)
|
||||
# generate filename
|
||||
fichan = fprefix + '_' + str(g+1) + '_' + str(c+1) + '_' + gname + '_' + cname + '.csv'
|
||||
# print channel
|
||||
RP.print_channel(chid,(outdirx+fichan).encode('utf-8'))
|
||||
14
lib/makefile
Normal file
14
lib/makefile
Normal file
@ -0,0 +1,14 @@
|
||||
|
||||
|
||||
CC = gcc -std=c++11 -stdlib=libc++
|
||||
CPPFLAGS = -O3 -Wall -Werror
|
||||
LIB = ../pugixml/
|
||||
|
||||
libtdmripper.a : tdm_ripper.o
|
||||
ar rcs $@ $^
|
||||
|
||||
tdm_ripper.o : tdm_ripper.cpp tdm_ripper.hpp
|
||||
$(CC) -c $(CPPFLAGS) -I $(LIB) $< -o $@
|
||||
|
||||
clean :
|
||||
rm -f *.o *.a
|
||||
@ -1,343 +0,0 @@
|
||||
// ------------------------------------------------------------------------- //
|
||||
/*
|
||||
for reference of the tdm data model, see
|
||||
|
||||
https://zone.ni.com/reference/de-XX/help/370858P-0113/tdmdatamodel/tdmdatamodel/tdm_headerfile/
|
||||
https://zone.ni.com/reference/de-XX/help/370858P-0113/tdmdatamodel/tdmdatamodel/tdm_datamodel/
|
||||
*/
|
||||
|
||||
#ifndef TDM_DATAMODEL
|
||||
#define TDM_DATAMODEL
|
||||
|
||||
#include <iostream>
|
||||
#include <iterator>
|
||||
#include <vector>
|
||||
#include <chrono>
|
||||
#include <sstream>
|
||||
|
||||
#include "tdm_format.hpp"
|
||||
|
||||
// -------------------------------------------------------------------------- //
|
||||
// tdm meta data
|
||||
|
||||
struct tdm_meta {
|
||||
|
||||
// usi:documentation
|
||||
std::string docu_expo_, docu_expover_;
|
||||
|
||||
// usi:model
|
||||
std::string model_name_, model_version_;
|
||||
std::string model_include_uri_;
|
||||
|
||||
// usi:include
|
||||
std::string byte_order_; // little versus big endian
|
||||
std::string file_url_; // path/URL of corresponding .tdx file
|
||||
|
||||
const std::string get_info() { return get_info(defformat); }
|
||||
const std::string get_info(format& formatter)
|
||||
{
|
||||
formatter.set_columns({ std::make_pair("exporter",docu_expo_),
|
||||
std::make_pair("exporterVersion",docu_expover_),
|
||||
std::make_pair("modelName",model_name_),
|
||||
std::make_pair("modelVersion",model_version_),
|
||||
std::make_pair("modelnsURI",model_include_uri_),
|
||||
std::make_pair("byteOrder",byte_order_),
|
||||
std::make_pair("fileURL",file_url_) } );
|
||||
|
||||
return formatter.get_info();
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
// -------------------------------------------------------------------------- //
|
||||
// block of data
|
||||
|
||||
struct block {
|
||||
|
||||
std::string id_;
|
||||
unsigned long int byte_offset_;
|
||||
unsigned long int length_;
|
||||
unsigned long int block_offset_, block_size_;
|
||||
std::string value_type_;
|
||||
|
||||
block () {
|
||||
id_ = std::string("");
|
||||
byte_offset_ = 0;
|
||||
length_ = 0;
|
||||
block_offset_ = 0;
|
||||
block_size_ = 0;
|
||||
value_type_ = std::string("");
|
||||
}
|
||||
|
||||
const std::string get_info() { return get_info(defformat); }
|
||||
const std::string get_info(format& formatter)
|
||||
{
|
||||
formatter.set_columns({ std::make_pair("block-id",id_),
|
||||
std::make_pair("byteOffset",std::to_string(byte_offset_)),
|
||||
std::make_pair("length",std::to_string(length_)),
|
||||
std::make_pair("blockOffset",std::to_string(block_offset_)),
|
||||
std::make_pair("blockSize",std::to_string(block_size_)),
|
||||
std::make_pair("valueType",value_type_) });
|
||||
|
||||
return formatter.get_info();
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
// -------------------------------------------------------------------------- //
|
||||
// tdm_root
|
||||
|
||||
struct tdm_root {
|
||||
|
||||
std::string id_;
|
||||
std::string name_;
|
||||
std::string description_;
|
||||
std::string title_;
|
||||
std::string author_;
|
||||
|
||||
std::string timestamp_;
|
||||
// std::chrono::time_point timepoint_; // from string 2008-05-06T17:20:12.65074539184570313
|
||||
|
||||
// std::stringstream ss;
|
||||
// ss<<"2008-05-06T17:20:12.65074539184570313";
|
||||
// std::cout<<ss.str()<<"\n";
|
||||
//
|
||||
// std::chrono::time_point start = std::chrono::high_resolution_clock::now();
|
||||
// std::time_t tt = std::chrono::system_clock::to_time_t(start);
|
||||
// // https://en.cppreference.com/w/cpp/io/manip/put_time
|
||||
// std::cout<<std::put_time(std::localtime(&tt),"%Y-%m-%dT%H:%M:%S")<<"\n";// "%F %T")<<"\n";
|
||||
//
|
||||
// // std::tm ts;
|
||||
// // // https://en.cppreference.com/w/cpp/io/manip/get_time
|
||||
// // std::get_time(&ts, "%Y-%m-%dT%H:%M:%S");
|
||||
// // auto tp = std::chrono::system_clock::from_time_t(std::mktime(&ts));
|
||||
// // std::time_t tt = std::chrono::system_clock::to_time_t(tp);
|
||||
// // // std::cout<<tt.strftime("%Y")<<"\n";
|
||||
// // std::cout<<ctime(&tt)<<"\n";
|
||||
|
||||
std::vector<std::string> channelgroups_;
|
||||
|
||||
const std::string get_info() { return get_info(defformat); }
|
||||
const std::string get_info(format& formatter)
|
||||
{
|
||||
formatter.set_columns({ std::make_pair("root-id",id_),
|
||||
std::make_pair("name",name_),
|
||||
std::make_pair("description",description_),
|
||||
std::make_pair("title",title_),
|
||||
std::make_pair("author",author_),
|
||||
std::make_pair("timestamp",timestamp_),
|
||||
std::make_pair("channelgroups",join_strings(channelgroups_)) });
|
||||
|
||||
return formatter.get_info();
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
// -------------------------------------------------------------------------- //
|
||||
// tdm_channelgroup
|
||||
|
||||
// https://zone.ni.com/reference/de-XX/help/370858P-0113/tdmdatamodel/tdmdatamodel/tdm_metadata_chngroup/
|
||||
|
||||
struct tdm_channelgroup {
|
||||
|
||||
std::string id_;
|
||||
std::string name_;
|
||||
std::string description_;
|
||||
std::string root_;
|
||||
std::vector<std::string> channels_; // referenced by id
|
||||
std::vector<std::string> submatrices_;
|
||||
|
||||
const std::string get_info() { return get_info(defformat); }
|
||||
const std::string get_info(format& formatter)
|
||||
{
|
||||
formatter.set_columns({ std::make_pair("group-id",id_),
|
||||
std::make_pair("name",name_),
|
||||
std::make_pair("description",description_),
|
||||
std::make_pair("root",root_),
|
||||
std::make_pair("channels",join_strings(channels_)),
|
||||
std::make_pair("submatrices",join_strings(submatrices_)) });
|
||||
|
||||
return formatter.get_info();
|
||||
}
|
||||
|
||||
const std::string get_json()
|
||||
{
|
||||
std::stringstream ss;
|
||||
ss<<"{"<<"\"group-id\":\""<<id_
|
||||
<<"\",\"name\":\""<<name_
|
||||
<<"\",\"description\":\""<<description_
|
||||
<<"\",\"root\":\""<<root_
|
||||
<<"\",\"channels\":\""<<join_strings(channels_)<<"\"}";
|
||||
return ss.str();
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
// -------------------------------------------------------------------------- //
|
||||
// tdm_channel
|
||||
|
||||
// https://zone.ni.com/reference/de-XX/help/370858P-0113/tdmdatamodel/tdmdatamodel/tdm_metadata_channel/
|
||||
|
||||
// waveform channel type
|
||||
enum class wf_time_pref_type {
|
||||
absolute,
|
||||
relative
|
||||
};
|
||||
|
||||
// additional elements for wave form channels (encoded as attributes in
|
||||
// <instance_attributes> of <tdm_channel>)
|
||||
// https://zone.ni.com/reference/de-XX/help/370858P-0113/tdmdatamodel/tdmdatamodel/tdm_tdxdata_waveform/
|
||||
struct waveform_channel {
|
||||
std::string wf_xname_;
|
||||
std::string wf_xunit_string_;
|
||||
std::string wf_start_time_;
|
||||
double wf_start_offset_;
|
||||
double wf_increment_;
|
||||
unsigned long wf_samples_;
|
||||
wf_time_pref_type wf_time_pref;
|
||||
};
|
||||
|
||||
struct tdm_channel {
|
||||
|
||||
std::string id_;
|
||||
std::string name_;
|
||||
std::string description_;
|
||||
std::string unit_string_;
|
||||
std::string datatype_;
|
||||
double minimum_, maximum_;
|
||||
std::string group_;
|
||||
std::vector<std::string> local_columns_;
|
||||
|
||||
// TODO
|
||||
waveform_channel wf_channel_;
|
||||
|
||||
const std::string get_info() { return get_info(defformat); }
|
||||
const std::string get_info(format& formatter)
|
||||
{
|
||||
formatter.set_columns({ std::make_pair("channel-id",id_),
|
||||
std::make_pair("name",name_),
|
||||
std::make_pair("description",description_),
|
||||
std::make_pair("unit_string",unit_string_),
|
||||
std::make_pair("datatype",datatype_),
|
||||
std::make_pair("minimum",std::to_string(minimum_)),
|
||||
std::make_pair("maximum",std::to_string(maximum_)),
|
||||
std::make_pair("group",group_),
|
||||
std::make_pair("local_columns",join_strings(local_columns_)) });
|
||||
|
||||
return formatter.get_info();
|
||||
}
|
||||
|
||||
const std::string get_json()
|
||||
{
|
||||
std::stringstream ss;
|
||||
ss<<"{"<<"\"channel-id\":\""<<id_
|
||||
<<"\",\"name\":\""<<name_
|
||||
<<"\",\"description\":\""<<description_
|
||||
<<"\",\"unit_string\":\""<<unit_string_
|
||||
<<"\",\"datatype\":\""<<datatype_
|
||||
<<"\",\"minimum\":\""<<minimum_
|
||||
<<"\",\"maximum\":\""<<maximum_
|
||||
<<"\",\"group\":\""<<group_<<"\"}";
|
||||
return ss.str();
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
// -------------------------------------------------------------------------- //
|
||||
// submatrix
|
||||
|
||||
// https://zone.ni.com/reference/de-XX/help/370858P-0113/tdmdatamodel/tdmdatamodel/tdm_tdxdata_submatrix/
|
||||
|
||||
struct submatrix {
|
||||
|
||||
std::string id_;
|
||||
std::string name_;
|
||||
std::string description_;
|
||||
std::string measurement_; // -> tdm_channelgroup id
|
||||
std::vector<std::string> local_columns_; // -> list of type "localcolumn"
|
||||
unsigned long int number_of_rows_; // -> number of values in channels
|
||||
|
||||
const std::string get_info() { return get_info(defformat); }
|
||||
const std::string get_info(format& formatter)
|
||||
{
|
||||
formatter.set_columns({ std::make_pair("submatrix-id",id_),
|
||||
std::make_pair("name",name_),
|
||||
std::make_pair("description",description_),
|
||||
std::make_pair("measurement",measurement_),
|
||||
std::make_pair("local_columns",join_strings(local_columns_)),
|
||||
std::make_pair("number_of_rows",std::to_string(number_of_rows_)) });
|
||||
|
||||
return formatter.get_info();
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
// -------------------------------------------------------------------------- //
|
||||
// localcolumn
|
||||
|
||||
enum class representation {
|
||||
explicit_, // !! explicit is C++ keyword!!
|
||||
implicit_linear_, // datatype is always DT_DOUBLE, no <value_sequence> for implicit_linear_!!
|
||||
raw_linear_ // datatype is always DT_DOUBLE
|
||||
};
|
||||
|
||||
// https://zone.ni.com/reference/de-XX/help/370858P-0113/tdmdatamodel/tdmdatamodel/tdm_tdxdata_localcolumn/
|
||||
|
||||
struct localcolumn {
|
||||
|
||||
std::string id_;
|
||||
std::string name_;
|
||||
std::string description_;
|
||||
std::string measurement_quantity_; // -> tdm_channel
|
||||
std::string submatrix_;
|
||||
|
||||
unsigned long int global_flag_;
|
||||
unsigned long int independent_;
|
||||
|
||||
double minimum_, maximum_;
|
||||
// representation sequence_representation_;
|
||||
std::string sequence_representation_;
|
||||
std::vector<double> generation_parameters_; // { offset, factor }
|
||||
|
||||
std::string values_; // -> refers to usi:data -> _sequence
|
||||
std::string external_id_;
|
||||
|
||||
localcolumn () {
|
||||
id_ = std::string("");
|
||||
name_ = std::string("");
|
||||
description_ = std::string("");
|
||||
measurement_quantity_ = std::string("");
|
||||
submatrix_ = std::string("");
|
||||
global_flag_ = 15;
|
||||
independent_ = 0;
|
||||
minimum_ = 0.0;
|
||||
maximum_ = 0.0;
|
||||
sequence_representation_ = std::string("explicit");
|
||||
generation_parameters_ = { 0.0, 1.0 };
|
||||
values_ = std::string("");
|
||||
external_id_ = std::string("");
|
||||
}
|
||||
|
||||
const std::string get_info() { return get_info(defformat); }
|
||||
const std::string get_info(format& formatter)
|
||||
{
|
||||
formatter.set_columns({ std::make_pair("localcolumn-id",id_),
|
||||
std::make_pair("name",name_),
|
||||
std::make_pair("description",description_),
|
||||
std::make_pair("measurement_quantity",measurement_quantity_),
|
||||
std::make_pair("submatrix_",submatrix_),
|
||||
std::make_pair("minimum",std::to_string(minimum_)),
|
||||
std::make_pair("maximum",std::to_string(maximum_)),
|
||||
std::make_pair("sequence_representation",sequence_representation_),
|
||||
std::make_pair("generation_parameters",join<double>(generation_parameters_)),
|
||||
std::make_pair("values",values_),
|
||||
std::make_pair("external",external_id_) });
|
||||
|
||||
return formatter.get_info();
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif
|
||||
|
||||
// -------------------------------------------------------------------------- //
|
||||
@ -1,354 +0,0 @@
|
||||
// -------------------------------------------------------------------------- //
|
||||
|
||||
#ifndef TDMDATATYPE
|
||||
#define TDMDATATYPE
|
||||
|
||||
// https://zone.ni.com/reference/de-XX/help/370858P-0113/tdmdatamodel/tdmdatamodel/tdm_header_tdx_data/
|
||||
|
||||
// !!!! define mapping of locally supported datatypes to tdm datatypes
|
||||
// !!!! this is where the magic happens !!!
|
||||
typedef short int eInt16Usi;
|
||||
typedef int eInt32Usi;
|
||||
typedef unsigned char eUInt8Usi;
|
||||
typedef unsigned short int eUInt16Usi;
|
||||
typedef unsigned int eUInt32Usi;
|
||||
typedef float eFloat32Usi;
|
||||
typedef double eFloat64Usi;
|
||||
typedef char eStringUsi;
|
||||
|
||||
class tdmdatatype
|
||||
{
|
||||
|
||||
protected:
|
||||
eInt16Usi sint16_; // 0
|
||||
eInt32Usi sint32_; // 1
|
||||
eUInt8Usi uint8_; // 2
|
||||
eUInt16Usi uint16_; // 3
|
||||
eUInt32Usi uint32_; // 4
|
||||
eFloat32Usi float32_; // 5
|
||||
eFloat64Usi float64_; // 6
|
||||
eStringUsi string_; // 7
|
||||
short int dtidx_; // \in \{0,...,7\}
|
||||
|
||||
public:
|
||||
tdmdatatype(): sint16_(0), sint32_(0),
|
||||
uint8_(0), uint16_(0), uint32_(0),
|
||||
float32_(0.0), float64_(0.0), string_(0),
|
||||
dtidx_(0) { };
|
||||
// every supported datatype gets its own constructor
|
||||
tdmdatatype(eInt16Usi num): sint16_(num), dtidx_(0) {};
|
||||
tdmdatatype(eInt32Usi num): sint32_(num), dtidx_(1) {};
|
||||
tdmdatatype(eUInt8Usi num): uint8_(num), dtidx_(2) {};
|
||||
tdmdatatype(eUInt16Usi num): uint16_(num), dtidx_(3) {};
|
||||
tdmdatatype(eUInt32Usi num): uint32_(num), dtidx_(4) {};
|
||||
tdmdatatype(eFloat32Usi num): float32_(num), dtidx_(5) {};
|
||||
tdmdatatype(eFloat64Usi num): float64_(num), dtidx_(6) {};
|
||||
tdmdatatype(eStringUsi num): string_(num), dtidx_(7) {};
|
||||
|
||||
// identify type
|
||||
short int& dtype() { return dtidx_; }
|
||||
|
||||
// copy constructor
|
||||
tdmdatatype(const tdmdatatype &num)
|
||||
{
|
||||
this->sint16_ = num.sint16_;
|
||||
this->sint32_ = num.sint32_;
|
||||
this->uint8_ = num.uint8_;
|
||||
this->uint16_ = num.uint16_;
|
||||
this->uint32_ = num.uint32_;
|
||||
this->float32_ = num.float32_;
|
||||
this->float64_ = num.float64_;
|
||||
this->string_ = num.string_;
|
||||
this->dtidx_ = num.dtidx_;
|
||||
}
|
||||
|
||||
// overall assignment operator
|
||||
tdmdatatype& operator=(const tdmdatatype &num)
|
||||
{
|
||||
if ( this != &num )
|
||||
{
|
||||
this->sint16_ = num.sint16_;
|
||||
this->sint32_ = num.sint32_;
|
||||
this->uint8_ = num.uint8_;
|
||||
this->uint16_ = num.uint16_;
|
||||
this->uint32_ = num.uint32_;
|
||||
this->float32_ = num.float32_;
|
||||
this->float64_ = num.float64_;
|
||||
this->string_ = num.string_;
|
||||
this->dtidx_ = num.dtidx_;
|
||||
}
|
||||
|
||||
return *this;
|
||||
}
|
||||
|
||||
// implement assignment operator for individual datatypes
|
||||
tdmdatatype& operator=(const eInt16Usi &num)
|
||||
{
|
||||
this->sint16_ = num;
|
||||
this->dtidx_ = 0;
|
||||
return *this;
|
||||
}
|
||||
tdmdatatype& operator=(const eInt32Usi &num)
|
||||
{
|
||||
this->sint32_ = num;
|
||||
this->dtidx_ = 1;
|
||||
return *this;
|
||||
}
|
||||
tdmdatatype& operator=(const eUInt8Usi &num)
|
||||
{
|
||||
this->uint8_ = num;
|
||||
this->dtidx_ = 2;
|
||||
return *this;
|
||||
}
|
||||
tdmdatatype& operator=(const eUInt16Usi &num)
|
||||
{
|
||||
this->uint16_ = num;
|
||||
this->dtidx_ = 3;
|
||||
return *this;
|
||||
}
|
||||
tdmdatatype& operator=(const eUInt32Usi &num)
|
||||
{
|
||||
this->uint32_ = num;
|
||||
this->dtidx_ = 4;
|
||||
return *this;
|
||||
}
|
||||
tdmdatatype& operator=(const eFloat32Usi &num)
|
||||
{
|
||||
this->float32_ = num;
|
||||
this->dtidx_ = 5;
|
||||
return *this;
|
||||
}
|
||||
tdmdatatype& operator=(const eFloat64Usi &num)
|
||||
{
|
||||
this->float64_ = num;
|
||||
this->dtidx_ = 6;
|
||||
return *this;
|
||||
}
|
||||
tdmdatatype& operator=(const eStringUsi &num)
|
||||
{
|
||||
this->string_ = num;
|
||||
this->dtidx_ = 7;
|
||||
return *this;
|
||||
}
|
||||
|
||||
// obtain number as double
|
||||
double as_double()
|
||||
{
|
||||
double num = 0.0;
|
||||
if ( dtidx_ == 0 ) num = (double)sint16_;
|
||||
else if ( dtidx_ == 1 ) num = (double)sint32_;
|
||||
else if ( dtidx_ == 2 ) num = (double)uint8_;
|
||||
else if ( dtidx_ == 3 ) num = (double)uint16_;
|
||||
else if ( dtidx_ == 4 ) num = (double)uint32_;
|
||||
else if ( dtidx_ == 5 ) num = (double)float32_;
|
||||
else if ( dtidx_ == 6 ) num = (double)float64_;
|
||||
else if ( dtidx_ == 7 ) num = (double)(int)string_;
|
||||
return num;
|
||||
}
|
||||
|
||||
// define custom stream operator to print the correct type
|
||||
friend std::ostream& operator<<(std::ostream& out, const tdmdatatype& num)
|
||||
{
|
||||
if ( num.dtidx_ == 0 ) out<<num.sint16_;
|
||||
else if ( num.dtidx_ == 1 ) out<<num.sint32_;
|
||||
else if ( num.dtidx_ == 2 ) out<<num.uint8_;
|
||||
else if ( num.dtidx_ == 3 ) out<<num.uint16_;
|
||||
else if ( num.dtidx_ == 4 ) out<<num.uint32_;
|
||||
else if ( num.dtidx_ == 5 ) out<<num.float32_;
|
||||
else if ( num.dtidx_ == 6 ) out<<num.float64_;
|
||||
else if ( num.dtidx_ == 7 ) out<<num.string_;
|
||||
return out;
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
// // base class for all tdm datatypes
|
||||
// class tdmdatatype
|
||||
// {
|
||||
// protected:
|
||||
// short int sint16_;
|
||||
// int sint32_;
|
||||
// unsigned char uint8_;
|
||||
// unsigned short int uint16_;
|
||||
// unsigned int uint32_;
|
||||
// float float32_;
|
||||
// double float64_;
|
||||
// public:
|
||||
// tdmdatatype(): sint16_(0), sint32_(0),
|
||||
// uint8_(0), uint16_(0), uint32_(0),
|
||||
// float32_(0.0), float64_(0.0) {};
|
||||
// virtual ~tdmdatatype() = default;
|
||||
// friend std::ostream& operator<<(std::ostream& out, const tdmdatatype& num)
|
||||
// {
|
||||
// return num.print(out);
|
||||
// }
|
||||
// virtual std::ostream& print(std::ostream& out) const
|
||||
// {
|
||||
// out<<"tdmdatatype";
|
||||
// return out;
|
||||
// }
|
||||
// };
|
||||
|
||||
// class eInt16Usi: public tdmdatatype
|
||||
// {
|
||||
// public:
|
||||
// eInt16Usi() { }
|
||||
// eInt16Usi(short int num) { sint16_ = num; }
|
||||
// // eInt16Usi& operator=(const eInt16Usi &num)
|
||||
// // {
|
||||
// // // self-assignment check
|
||||
// // if ( this != &num)
|
||||
// // {
|
||||
// // this->sint16_ = num.sint16_;
|
||||
// // }
|
||||
// // return *this;
|
||||
// // }
|
||||
// friend std::ostream& operator<<(std::ostream& out, const eInt16Usi& num)
|
||||
// {
|
||||
// return num.print(out);
|
||||
// }
|
||||
// std::ostream& print(std::ostream& out) const override
|
||||
// {
|
||||
// out<<sint16_;
|
||||
// return out;
|
||||
// }
|
||||
// };
|
||||
//
|
||||
// class eInt32Usi: public tdmdatatype
|
||||
// {
|
||||
// public:
|
||||
// eInt32Usi() { }
|
||||
// eInt32Usi(int num) { sint32_ = num; }
|
||||
// friend std::ostream& operator<<(std::ostream& out, const eInt32Usi& num)
|
||||
// {
|
||||
// return num.print(out);
|
||||
// }
|
||||
// std::ostream& print(std::ostream& out) const override
|
||||
// {
|
||||
// out<<sint32_;
|
||||
// return out;
|
||||
// }
|
||||
// };
|
||||
//
|
||||
// class eUInt8Usi: public tdmdatatype
|
||||
// {
|
||||
// public:
|
||||
// eUInt8Usi() { }
|
||||
// eUInt8Usi(int num) { uint8_ = num; }
|
||||
// friend std::ostream& operator<<(std::ostream& out, const eUInt8Usi& num)
|
||||
// {
|
||||
// return num.print(out);
|
||||
// }
|
||||
// std::ostream& print(std::ostream& out) const override
|
||||
// {
|
||||
// out<<uint8_;
|
||||
// return out;
|
||||
// }
|
||||
// };
|
||||
//
|
||||
// class eUInt16Usi: public tdmdatatype
|
||||
// {
|
||||
// public:
|
||||
// eUInt16Usi() { }
|
||||
// eUInt16Usi(int num) { uint16_ = num; }
|
||||
// friend std::ostream& operator<<(std::ostream& out, const eUInt16Usi& num)
|
||||
// {
|
||||
// return num.print(out);
|
||||
// }
|
||||
// std::ostream& print(std::ostream& out) const override
|
||||
// {
|
||||
// out<<uint16_;
|
||||
// return out;
|
||||
// }
|
||||
// };
|
||||
//
|
||||
// class eUInt32Usi: public tdmdatatype
|
||||
// {
|
||||
// public:
|
||||
// eUInt32Usi() { }
|
||||
// eUInt32Usi(int num) { uint32_ = num; }
|
||||
// friend std::ostream& operator<<(std::ostream& out, const eUInt32Usi& num)
|
||||
// {
|
||||
// return num.print(out);
|
||||
// }
|
||||
// std::ostream& print(std::ostream& out) const override
|
||||
// {
|
||||
// out<<uint32_;
|
||||
// return out;
|
||||
// }
|
||||
// };
|
||||
//
|
||||
// class eFloat32Usi: public tdmdatatype
|
||||
// {
|
||||
// public:
|
||||
// eFloat32Usi() { }
|
||||
// eFloat32Usi(int num) { float32_ = num; }
|
||||
// friend std::ostream& operator<<(std::ostream& out, const eFloat32Usi& num)
|
||||
// {
|
||||
// return num.print(out);
|
||||
// }
|
||||
// std::ostream& print(std::ostream& out) const override
|
||||
// {
|
||||
// out<<float32_;
|
||||
// return out;
|
||||
// }
|
||||
// };
|
||||
//
|
||||
// class eFloat64Usi: public tdmdatatype
|
||||
// {
|
||||
// public:
|
||||
// eFloat64Usi() { }
|
||||
// eFloat64Usi(int num) { float64_ = num; }
|
||||
// friend std::ostream& operator<<(std::ostream& out, const eFloat64Usi& num)
|
||||
// {
|
||||
// return num.print(out);
|
||||
// }
|
||||
// std::ostream& print(std::ostream& out) const override
|
||||
// {
|
||||
// out<<float64_;
|
||||
// return out;
|
||||
// }
|
||||
// };
|
||||
|
||||
struct tdm_datatype {
|
||||
|
||||
std::string name_;
|
||||
std::string channel_datatype_;
|
||||
int numeric_;
|
||||
std::string value_sequence_;
|
||||
unsigned int size_;
|
||||
std::string description_;
|
||||
|
||||
const std::string get_info() { return get_info(defformat); }
|
||||
const std::string get_info(format& formatter)
|
||||
{
|
||||
formatter.set_columns( { std::make_pair("name",name_),
|
||||
std::make_pair("channel_datatype",channel_datatype_),
|
||||
std::make_pair("name",name_),
|
||||
std::make_pair("value_sequence",value_sequence_),
|
||||
std::make_pair("size",std::to_string(size_)),
|
||||
std::make_pair("description",description_) } );
|
||||
|
||||
return formatter.get_info();
|
||||
}
|
||||
};
|
||||
|
||||
const std::vector<tdm_datatype> tdm_datatypes = {
|
||||
|
||||
{"eInt16Usi","DT_SHORT",2,"short_sequence",2,"signed 16 bit integer"},
|
||||
{"eInt32Usi","DT_LONG",6,"long_sequence",4,"signed 32 bit integer"},
|
||||
|
||||
{"eUInt8Usi","DT_BYTE",5,"byte_sequence",1,"unsigned 8 bit integer"},
|
||||
{"eUInt16Usi","DT_SHORT",2,"short_sequence",2,"unsigned 16 bit integer"},
|
||||
{"eUInt32Usi","DT_LONG",6,"long_sequence",4,"unsigned 32 bit integer"},
|
||||
|
||||
{"eFloat32Usi","DT_FLOAT",3,"float_sequence",4,"32 bit float"},
|
||||
{"eFloat64Usi","DT_DOUBLE",7,"double_sequence",8,"64 bit double"},
|
||||
|
||||
{"eStringUsi","DT_STRING",1,"string_sequence",1,"text"}
|
||||
|
||||
};
|
||||
|
||||
#endif
|
||||
|
||||
// -------------------------------------------------------------------------- //
|
||||
@ -1,119 +0,0 @@
|
||||
// -------------------------------------------------------------------------- //
|
||||
|
||||
#ifndef TDMFORMAT
|
||||
#define TDMFORMAT
|
||||
|
||||
// format output of info strings for terminal and file table
|
||||
class format
|
||||
{
|
||||
|
||||
private:
|
||||
|
||||
unsigned int width_;
|
||||
bool tabular_;
|
||||
bool header_;
|
||||
char sep_;
|
||||
std::vector<std::pair<std::string,std::string>> columns_;
|
||||
|
||||
public:
|
||||
|
||||
format(int width = 25, bool tabular = false, bool header = false, char sep = ' '):
|
||||
width_(width), tabular_(tabular), header_(header), sep_(sep)
|
||||
{
|
||||
|
||||
}
|
||||
|
||||
void set_width(int width)
|
||||
{
|
||||
width_ = width;
|
||||
}
|
||||
|
||||
void set_tabular(bool tabular)
|
||||
{
|
||||
tabular_ = tabular;
|
||||
}
|
||||
|
||||
void set_header(bool header)
|
||||
{
|
||||
header_ = header;
|
||||
}
|
||||
|
||||
void set_sep(char sep)
|
||||
{
|
||||
sep_ = sep;
|
||||
}
|
||||
|
||||
void set_columns(std::vector<std::pair<std::string,std::string>> columns)
|
||||
{
|
||||
columns_ = columns;
|
||||
}
|
||||
|
||||
std::string get_info()
|
||||
{
|
||||
std::stringstream ss;
|
||||
|
||||
for ( std::vector<std::pair<std::string,std::string>>::iterator it = columns_.begin();
|
||||
it != columns_.end(); ++it )
|
||||
{
|
||||
if ( tabular_ )
|
||||
{
|
||||
// header or body of table
|
||||
std::string entry = header_? it->first : it->second;
|
||||
|
||||
// make broad aligned columns for human reader
|
||||
if ( sep_ == ' ' )
|
||||
{
|
||||
entry = entry.size() > width_-2 ? entry.substr(0,width_-2) : entry;
|
||||
// if ( it == columns_.begin() && !header_ ) ss<<" ";
|
||||
ss<<std::setw(width_)<<std::left<<entry;
|
||||
}
|
||||
// make compressed csv like columns
|
||||
else
|
||||
{
|
||||
ss<<entry;
|
||||
if ( std::next(it,1) != columns_.end() ) ss<<sep_;
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
ss<<std::setw(width_)<<std::left<<(it->first+std::string(":"))<<it->second<<"\n";
|
||||
}
|
||||
}
|
||||
|
||||
return ss.str();
|
||||
}
|
||||
};
|
||||
|
||||
// define default formatter
|
||||
static format defformat(25,false,false,',');
|
||||
|
||||
// join a list of strings
|
||||
static std::string join_strings(std::vector<std::string> &thestring, const char* sep = " ")
|
||||
{
|
||||
std::string joined;
|
||||
for ( std::vector<std::string>::iterator it = thestring.begin();
|
||||
it != thestring.end(); ++it )
|
||||
{
|
||||
joined += std::next(it,1) != thestring.end() ? ( *it + std::string(sep) ) : *it;
|
||||
}
|
||||
|
||||
return joined;
|
||||
}
|
||||
|
||||
// join a list of numbers
|
||||
template<class numtype>
|
||||
static std::string join(std::vector<numtype> &thevec, const char* sep = " ")
|
||||
{
|
||||
std::string joined;
|
||||
for ( unsigned int i = 0; i < thevec.size(); i++ )
|
||||
{
|
||||
joined += std::to_string(thevec.at(i));
|
||||
if ( i+1 < thevec.size() ) joined += std::string(sep);
|
||||
}
|
||||
|
||||
return joined;
|
||||
}
|
||||
|
||||
#endif
|
||||
|
||||
// -------------------------------------------------------------------------- //
|
||||
566
lib/tdm_ripper.cpp
Normal file
566
lib/tdm_ripper.cpp
Normal file
@ -0,0 +1,566 @@
|
||||
|
||||
#include "tdm_ripper.hpp"
|
||||
|
||||
tdm_ripper::tdm_ripper(std::string tdmfile, std::string tdxfile,
|
||||
bool suppress_status, bool neglect_empty_groups):
|
||||
tdmfile_(tdmfile), tdxfile_(tdxfile), suppress_status_(suppress_status),
|
||||
neglect_empty_groups_(neglect_empty_groups), num_empty_groups_(0),
|
||||
num_channels_(0), num_groups_(0), channel_id_(0), inc_id_(0), units_(0),
|
||||
channel_name_(0), group_id_(0), group_name_(0),
|
||||
num_channels_group_(0), channels_group_(0), channel_ext_(0), minmax_(0),
|
||||
byteoffset_(0), length_(0), type_(0), external_id_(0)
|
||||
{
|
||||
datatypes_ = {
|
||||
{"eInt8Usi",8},
|
||||
{"eInt16Usi",16},
|
||||
{"eInt32Usi",32},
|
||||
{"eInt64Usi",64},
|
||||
{"eUInt8Usi",8},
|
||||
{"eUInt16Usi",16},
|
||||
{"eUInt32Usi",32},
|
||||
{"eUInt64Usi",64},
|
||||
{"eFloat32Usi",32},
|
||||
{"eFloat64Usi",64}
|
||||
};
|
||||
|
||||
// make sure the provided file is a .tdm file
|
||||
assert( tdmfile_.compare("") != 0 && "please provide a valid .tdm file" );
|
||||
std::string::size_type idx;
|
||||
idx = tdmfile_.find_last_of(".");
|
||||
assert( idx != std::string::npos && "there's no file extension at all - .tdm is required" );
|
||||
assert( tdmfile_.substr(tdmfile_.find_last_of(".")+1).compare("tdm") == 0 && "it's not a .tdm file" );
|
||||
|
||||
// setup of xml-parser
|
||||
xml_result_ = xml_doc_.load_file(tdmfile_.c_str());
|
||||
if ( !suppress_status_ )
|
||||
{
|
||||
std::cout<<"\nloading and parsing file: "<<xml_result_.description()<<"\n";
|
||||
std::cout<<"\nencoding: "<<(pugi::xml_encoding)xml_result_.encoding<<"\n\n";
|
||||
}
|
||||
|
||||
pugi::xml_node subtreeincl = xml_doc_.child("usi:tdm").child("usi:include");
|
||||
|
||||
if ( !suppress_status_ )
|
||||
{
|
||||
std::cout<<"file modified: "<<xml_doc_.child("usi:tdm").child("usi:data")
|
||||
.child("tdm_root").child_value("datetime")<<"\n\n";
|
||||
}
|
||||
|
||||
// obtain corresponding .tdx filename given in .tdm file
|
||||
if ( tdxfile_.compare("") == 0 )
|
||||
{
|
||||
tdxfile_ = tdmfile_.substr(0, tdmfile_.find_last_of("\\/"))
|
||||
+std::string("/")+subtreeincl.child("file").attribute("url").value();
|
||||
}
|
||||
|
||||
// obtain endianness specified in .tdm file
|
||||
std::string endianness(subtreeincl.child("file").attribute("byteOrder").value());
|
||||
endianness_ = endianness.compare("littleEndian") == 0 ? true : false;
|
||||
|
||||
// obtain machine's endianess
|
||||
int num = 1;
|
||||
machine_endianness_ = ( *(char*)&num == 1 );
|
||||
assert( machine_endianness_ == endianness_ );
|
||||
|
||||
if ( !suppress_status_ )
|
||||
{
|
||||
std::cout<<"required .tdx-file is '"<<tdxfile_<<"'\n\n";
|
||||
}
|
||||
|
||||
parse_structure();
|
||||
|
||||
// open .tdx and stream all binary data into vector
|
||||
std::ifstream fin(tdxfile_.c_str(),std::ifstream::binary);
|
||||
assert( fin.good() && "failed to open .tdx-file" );
|
||||
if ( !fin.good() ) std::cout<<"failed to open .tdx-file\n\n";
|
||||
// assert( errno == 0 );
|
||||
// std::cout<<"error code "<<strerror(errno)<<"\n\n";
|
||||
std::vector<unsigned char> tdxbuf((std::istreambuf_iterator<char>(fin)),
|
||||
(std::istreambuf_iterator<char>()));
|
||||
tdxbuf_ = tdxbuf;
|
||||
|
||||
if ( !suppress_status_ )
|
||||
{
|
||||
std::cout<<"number of bytes in binary file: "<<tdxbuf_.size()<<"\n\n";
|
||||
}
|
||||
}
|
||||
|
||||
void tdm_ripper::parse_structure()
|
||||
{
|
||||
// get node with channel and endianess information
|
||||
pugi::xml_node subtreefile = xml_doc_.child("usi:tdm").child("usi:include").child("file");
|
||||
|
||||
for (pugi::xml_node anode: subtreefile.children())
|
||||
{
|
||||
// count overall number of channels
|
||||
num_channels_++;
|
||||
|
||||
// get byteoffset of channel
|
||||
byteoffset_.push_back(atoi(anode.attribute("byteOffset").value()));
|
||||
|
||||
// get length of channel
|
||||
length_.push_back(atoi(anode.attribute("length").value()));
|
||||
|
||||
// find datatype of channel
|
||||
type_.push_back(anode.attribute("valueType").value());
|
||||
|
||||
// external id of channel
|
||||
external_id_.push_back(anode.attribute("id").value());
|
||||
}
|
||||
|
||||
// get node with channels and groups
|
||||
pugi::xml_node subtreedata = xml_doc_.child("usi:tdm").child("usi:data");
|
||||
|
||||
// extract basic information about available groups
|
||||
int groupcount = 0;
|
||||
for (pugi::xml_node anode: subtreedata.children())
|
||||
{
|
||||
// get meta-info contained in tdm_root element
|
||||
if ( std::string(anode.name()).compare("tdm_root") == 0 )
|
||||
{
|
||||
// preliminiary: extract some hard-coded information tags only
|
||||
root_info_.insert(std::pair<std::string,std::string>("name",anode.child_value("name")));
|
||||
root_info_.insert(std::pair<std::string,std::string>("description",anode.child_value("description")));
|
||||
root_info_.insert(std::pair<std::string,std::string>("title",anode.child_value("title")));
|
||||
root_info_.insert(std::pair<std::string,std::string>("author",anode.child_value("author")));
|
||||
}
|
||||
|
||||
if ( std::string(anode.name()).compare("tdm_channelgroup") == 0 )
|
||||
{
|
||||
groupcount++;
|
||||
|
||||
for ( pugi::xml_node mnode: anode.child("instance_attributes").children() )
|
||||
{
|
||||
// preliminiary fix for Conti-TDM files since values are one arbitrary tree level above
|
||||
bool pretdmfix = ( std::string(mnode.child_value()).compare("") == 0 ) ? false : true;
|
||||
|
||||
if ( pretdmfix )
|
||||
{
|
||||
meta_info_.insert(std::pair<std::string,std::string>(mnode.attribute("name").value(),mnode.child_value()));
|
||||
}
|
||||
else
|
||||
{
|
||||
meta_info_.insert(std::pair<std::string,std::string>(mnode.attribute("name").value(),mnode.child_value("s")));
|
||||
}
|
||||
}
|
||||
|
||||
int numchann = count_occ_string(anode.child_value("channels"),"id");
|
||||
if ( numchann > 0 || !neglect_empty_groups_ )
|
||||
{
|
||||
num_groups_++;
|
||||
group_id_.push_back(anode.attribute("id").value());
|
||||
group_name_.push_back(anode.child_value("name"));
|
||||
num_channels_group_.push_back(numchann);
|
||||
|
||||
// get time-stamp
|
||||
pugi::xml_node insatt = anode.child("instance_attributes");
|
||||
std::pair<std::string,std::string> startstop;
|
||||
for ( pugi::xml_node bnode: insatt.children() )
|
||||
{
|
||||
assert( std::string(bnode.name()).compare("double_attribute") == 0 );
|
||||
if ( std::string(bnode.attribute("name").value()).compare("Starttime") == 0 )
|
||||
{
|
||||
startstop.first = bnode.child_value();
|
||||
}
|
||||
else if ( std::string(bnode.attribute("name").value()).compare("Stoptime") == 0 )
|
||||
{
|
||||
startstop.second = bnode.child_value();
|
||||
}
|
||||
else
|
||||
{
|
||||
startstop.first = "";
|
||||
startstop.second = "";
|
||||
}
|
||||
}
|
||||
group_timestamp_.push_back(startstop);
|
||||
}
|
||||
if ( numchann == 0 ) num_empty_groups_++;
|
||||
}
|
||||
}
|
||||
|
||||
// obtain list of xpointers and ids to assign channels
|
||||
for (pugi::xml_node anode: subtreedata.children())
|
||||
{
|
||||
if ( std::string(anode.name()).compare("tdm_channel") == 0 )
|
||||
{
|
||||
std::string id(anode.attribute("id").value());
|
||||
std::string val = get_str_between(anode.child_value("local_columns"),"\"","\"");
|
||||
xml_local_columns_.insert(std::pair<std::string,std::string>(id,val));
|
||||
}
|
||||
|
||||
if ( std::string(anode.name()).compare("localcolumn") == 0 )
|
||||
{
|
||||
std::string id(anode.attribute("id").value());
|
||||
std::string val = get_str_between(anode.child_value("values"),"\"","\"");
|
||||
xml_values_.insert(std::pair<std::string,std::string>(id,val));
|
||||
}
|
||||
|
||||
if ( std::string(anode.name()).compare("double_sequence") == 0
|
||||
|| std::string(anode.name()).compare("long_sequence") == 0 )
|
||||
{
|
||||
std::string id(anode.attribute("id").value());
|
||||
std::string val = anode.child("values").attribute("external").value();
|
||||
xml_double_sequence_.insert(std::pair<std::string,std::string>(id,val));
|
||||
}
|
||||
}
|
||||
|
||||
if ( !suppress_status_ )
|
||||
{
|
||||
std::cout<<"number of pairs in\n";
|
||||
std::cout<<std::setw(25)<<std::left<<"xml_local_columns_:"<<xml_local_columns_.size()<<"\n";
|
||||
std::cout<<std::setw(25)<<std::left<<"xml_values_:"<<xml_values_.size()<<"\n";
|
||||
std::cout<<std::setw(25)<<std::left<<"xml_double_sequence_:"<<xml_double_sequence_.size()<<"\n";
|
||||
std::cout<<std::right<<"\n\n";
|
||||
|
||||
std::cout<<"meta-info snippets "<<meta_info_.size()<<"\n\n";
|
||||
}
|
||||
|
||||
// extract basic information about available channels
|
||||
// int prog = 0;
|
||||
for (pugi::xml_node anode: subtreedata.children())
|
||||
{
|
||||
if ( std::string(anode.name()).compare("tdm_channel") == 0 )
|
||||
{
|
||||
// prog++;
|
||||
// std::cout<<"processing channel "<<prog<<"\n";
|
||||
|
||||
channel_id_.push_back(anode.attribute("id").value());
|
||||
channel_name_.push_back(anode.child_value("name"));
|
||||
std::string groupid(anode.child_value("group"));
|
||||
for ( int g = 0; g < num_groups_; g++ )
|
||||
{
|
||||
if ( groupid.find(group_id_[g]) != std::string::npos ) channels_group_.push_back(g);
|
||||
}
|
||||
|
||||
// obtain measurement unit of channel
|
||||
units_.push_back(anode.child_value("unit_string"));
|
||||
if ( (*(units_.end()-1)).compare("°C") == 0 ) (*(units_.end()-1)) = "deg. Celsius";
|
||||
|
||||
// obtain minimum/maximum of channel
|
||||
std::pair<double,double> minmaxchan(atof(anode.child_value("minimum")),
|
||||
atof(anode.child_value("maximum")));
|
||||
minmax_.push_back(minmaxchan);
|
||||
|
||||
// get correct assignment of channels to byteoffset, length and datatype
|
||||
std::string locolvalext;
|
||||
locolvalext = xml_double_sequence_[xml_values_[xml_local_columns_[anode.attribute("id").value()]]];
|
||||
|
||||
// save external id of channel and get corresponding channel index
|
||||
inc_id_.push_back(locolvalext);
|
||||
int extid = 1;
|
||||
for ( int i = 0; i < (int)external_id_.size(); i++ )
|
||||
{
|
||||
if ( external_id_[i].compare(locolvalext) == 0 ) extid = i;
|
||||
}
|
||||
channel_ext_.push_back(extid);
|
||||
}
|
||||
}
|
||||
|
||||
// std::string keyinit("usi23258");
|
||||
// std::cout<<"xml test "<<xml_double_sequence_[xml_values_[xml_local_columns_[keyinit]]]<<"\n\n";
|
||||
|
||||
// for ( auto el: minmax_ ) std::cout<<el.first<<" "<<el.second<<"\n";
|
||||
// std::cout<<"\n\n";
|
||||
|
||||
// check consistency of number of channel-groups
|
||||
int numgroups = count_occ_string(subtreedata.child("tdm_root").child_value("channelgroups"),"id");
|
||||
assert( (neglect_empty_groups_ && numgroups == num_groups_+num_empty_groups_)
|
||||
|| (!neglect_empty_groups_ && numgroups == num_groups_) );
|
||||
|
||||
// check consistency of number of channels
|
||||
assert( num_channels_ == (int)channel_id_.size()
|
||||
&& num_channels_ == (int)channel_name_.size()
|
||||
&& num_channels_ == (int)channels_group_.size() );
|
||||
}
|
||||
|
||||
void tdm_ripper::list_channels(std::ostream& gout, int width, int maxshow)
|
||||
{
|
||||
gout<<std::setw(width)<<"index";
|
||||
gout<<std::setw(width)<<"id";
|
||||
gout<<std::setw(width)<<"inc_id";
|
||||
gout<<std::setw(2*width)<<"name";
|
||||
gout<<std::setw(width)<<"offset";
|
||||
gout<<std::setw(width)<<"length";
|
||||
gout<<std::setw(width)<<"datatype";
|
||||
gout<<std::setw(width)<<"unit";
|
||||
gout<<std::setw(width)<<"minimum";
|
||||
gout<<std::setw(width)<<"maximum";
|
||||
gout<<std::setw(width)<<"group";
|
||||
gout<<std::setw(width)<<"group id";
|
||||
gout<<std::setw(width)<<"group name";
|
||||
gout<<std::setw(width)<<"num channels";
|
||||
gout<<"\n";
|
||||
gout<<std::setfill('-')<<std::setw(15*width+1)<<"\n";
|
||||
gout<<std::setfill(' ');
|
||||
|
||||
for ( int i = 0; i < num_channels_ && i < maxshow; i++ )
|
||||
{
|
||||
gout<<std::setw(width)<<i+1;
|
||||
gout<<std::setw(width)<<channel_id_[i];
|
||||
gout<<std::setw(width)<<inc_id_[i];
|
||||
gout<<std::setw(2*width)<<channel_name_[i];
|
||||
gout<<std::setw(width)<<byteoffset_[channel_ext_[i]];
|
||||
gout<<std::setw(width)<<length_[channel_ext_[i]];
|
||||
gout<<std::setw(width)<<type_[channel_ext_[i]];
|
||||
gout<<std::setw(width)<<units_[i];
|
||||
gout<<std::setw(width)<<minmax_[i].first;
|
||||
gout<<std::setw(width)<<minmax_[i].second;
|
||||
gout<<std::setw(width)<<channels_group_[i];
|
||||
gout<<std::setw(width)<<group_id_[channels_group_[i]];
|
||||
gout<<std::setw(width)<<group_name_[channels_group_[i]];
|
||||
gout<<std::setw(width)<<num_channels_group_[channels_group_[i]];
|
||||
gout<<"\n";
|
||||
}
|
||||
gout<<"\n\n";
|
||||
|
||||
if ( num_channels_ > 3*maxshow )
|
||||
{
|
||||
for ( int i = num_channels_-maxshow; i < num_channels_; i++ )
|
||||
{
|
||||
gout<<std::setw(width)<<i+1;
|
||||
gout<<std::setw(width)<<channel_id_[i];
|
||||
gout<<std::setw(width)<<inc_id_[i];
|
||||
gout<<std::setw(2*width)<<channel_name_[i];
|
||||
gout<<std::setw(width)<<byteoffset_[channel_ext_[i]];
|
||||
gout<<std::setw(width)<<length_[channel_ext_[i]];
|
||||
gout<<std::setw(width)<<type_[channel_ext_[i]];
|
||||
gout<<std::setw(width)<<units_[i];
|
||||
gout<<std::setw(width)<<minmax_[i].first;
|
||||
gout<<std::setw(width)<<minmax_[i].second;
|
||||
gout<<std::setw(width)<<channels_group_[i];
|
||||
gout<<std::setw(width)<<group_id_[channels_group_[i]];
|
||||
gout<<std::setw(width)<<group_name_[channels_group_[i]];
|
||||
gout<<std::setw(width)<<num_channels_group_[channels_group_[i]];
|
||||
gout<<"\n";
|
||||
}
|
||||
gout<<"\n\n";
|
||||
}
|
||||
}
|
||||
|
||||
void tdm_ripper::list_groups(std::ostream& gout, int width, int maxshow)
|
||||
{
|
||||
// if present, show timestamps
|
||||
bool showts = ( group_timestamp_[0].first.compare("") != 0 );
|
||||
|
||||
gout<<std::setw(width)<<"group";
|
||||
gout<<std::setw(width)<<"group id";
|
||||
gout<<std::setw(width)<<"group name";
|
||||
gout<<std::setw(width)<<"num channels";
|
||||
if ( showts ) gout<<std::setw(2*width)<<"start time";
|
||||
if ( showts ) gout<<std::setw(2*width)<<"stop time";
|
||||
gout<<"\n";
|
||||
gout<<std::setfill('-')<<(showts?std::setw(8*width+1):std::setw(4*width+1))<<"\n";
|
||||
gout<<std::setfill(' ');
|
||||
|
||||
for ( int i = 0; i < num_groups_ && i < maxshow; i++ )
|
||||
{
|
||||
gout<<std::setw(width)<<i+1;
|
||||
gout<<std::setw(width)<<group_id_[i];
|
||||
gout<<std::setw(width)<<group_name_[i];
|
||||
gout<<std::setw(width)<<num_channels_group_[i];
|
||||
if ( showts ) gout<<std::setw(2*width)<<time_stamp(i,true);
|
||||
if ( showts ) gout<<std::setw(2*width)<<time_stamp(i,false);
|
||||
gout<<"\n";
|
||||
}
|
||||
gout<<"\n\n";
|
||||
|
||||
if ( num_groups_ > 3*maxshow )
|
||||
{
|
||||
for ( int i = num_groups_-maxshow; i < num_groups_; i++ )
|
||||
{
|
||||
gout<<std::setw(width)<<i+1;
|
||||
gout<<std::setw(width)<<group_id_[i];
|
||||
gout<<std::setw(width)<<group_name_[i];
|
||||
gout<<std::setw(width)<<num_channels_group_[i];
|
||||
if ( showts ) gout<<std::setw(2*width)<<time_stamp(i,true);
|
||||
if ( showts ) gout<<std::setw(2*width)<<time_stamp(i,false);
|
||||
gout<<"\n";
|
||||
}
|
||||
gout<<"\n\n";
|
||||
}
|
||||
}
|
||||
|
||||
void tdm_ripper::show_structure()
|
||||
{
|
||||
int width = 25;
|
||||
|
||||
std::cout<<"second level tree elements:\n";
|
||||
for ( pugi::xml_node child: xml_doc_.child("usi:tdm").children())
|
||||
{
|
||||
std::cout<<child.name()<<"\n";
|
||||
}
|
||||
std::cout<<"\n\n";
|
||||
|
||||
pugi::xml_node subtreeincl = xml_doc_.child("usi:tdm").child("usi:include");
|
||||
|
||||
// most important information in .tdm file
|
||||
// - byteOffset provides the starting position of particular channel
|
||||
// - length is the number of e.g. double (=8byte) value in that channel
|
||||
std::cout<<"file properties:\n\n";
|
||||
for (pugi::xml_node anode: subtreeincl.children("file"))
|
||||
{
|
||||
for (pugi::xml_attribute attr: anode.attributes())
|
||||
{
|
||||
std::cout<<" "<<attr.name()<<" = "<<attr.value()<<" ";
|
||||
}
|
||||
std::cout<<"\n\n";
|
||||
|
||||
int iter = 0;
|
||||
for (pugi::xml_node child: anode.children())
|
||||
{
|
||||
if ( iter < 100 )
|
||||
{
|
||||
std::cout<<std::right;
|
||||
std::cout<<std::setw(width)<<iter;
|
||||
std::cout<<std::setw(width)<<child.name();
|
||||
std::cout<<std::setw(width)<<child.value();
|
||||
|
||||
for (pugi::xml_attribute attr: child.attributes())
|
||||
{
|
||||
std::cout<<std::right<<attr.name()<<" = "<<std::setw(width)<<std::left<<attr.value()<<" ";
|
||||
|
||||
if ( std::string(attr.name()).compare("valueType") == 0 )
|
||||
{
|
||||
std::cout<<"number of bytes = "<<datatypes_[attr.value()]/CHAR_BIT;
|
||||
}
|
||||
}
|
||||
std::cout<<"\n";
|
||||
}
|
||||
|
||||
iter++;
|
||||
}
|
||||
}
|
||||
std::cout<<"\n\n";
|
||||
}
|
||||
|
||||
void tdm_ripper::list_datatypes()
|
||||
{
|
||||
// show datatype size on machine
|
||||
int width = 30;
|
||||
|
||||
std::cout<<std::setw(width)<<"size of short int: "<<sizeof(short int)<<"\n";
|
||||
std::cout<<std::setw(width)<<"size of int: "<<sizeof(int)<<"\n";
|
||||
std::cout<<std::setw(width)<<"size of long int: "<<sizeof(long int)<<"\n";
|
||||
std::cout<<std::setw(width)<<"size of unsigned short int: "<<sizeof(unsigned short int)<<"\n";
|
||||
std::cout<<std::setw(width)<<"size of unsigned int: "<<sizeof(unsigned int)<<"\n";
|
||||
std::cout<<std::setw(width)<<"size of unsigned long int: "<<sizeof(unsigned long int)<<"\n\n";
|
||||
|
||||
std::cout<<std::setw(width)<<"size of float: "<<sizeof(float)<<"\n";
|
||||
std::cout<<std::setw(width)<<"size of double: "<<sizeof(double)<<"\n";
|
||||
std::cout<<std::setw(width)<<"size of long double: "<<sizeof(long double)<<"\n\n";
|
||||
}
|
||||
|
||||
// convert array of chars to integer
|
||||
int tdm_ripper::convert_int(std::vector<unsigned char> bych)
|
||||
{
|
||||
assert( bych.size() == sizeof(int) );
|
||||
assert( endianness_ );
|
||||
|
||||
int df = 0.0;
|
||||
|
||||
uint8_t *dfcast = reinterpret_cast<uint8_t*>(&df);
|
||||
|
||||
for ( int i = 0; i < (int)sizeof(int); i++ )
|
||||
{
|
||||
dfcast[i] = (int)bych[i];
|
||||
}
|
||||
|
||||
return df;
|
||||
}
|
||||
|
||||
// disassemble single integer into array of chars
|
||||
std::vector<unsigned char> tdm_ripper::convert_int(int df)
|
||||
{
|
||||
assert( endianness_ );
|
||||
|
||||
std::vector<unsigned char> bych((int)sizeof(int));
|
||||
|
||||
uint8_t *dfcast = reinterpret_cast<uint8_t*>(&df);
|
||||
|
||||
for ( int i = 0; i < (int)sizeof(int); i++ )
|
||||
{
|
||||
bych[i] = (int)dfcast[i];
|
||||
}
|
||||
|
||||
return bych;
|
||||
}
|
||||
|
||||
// convert array of chars to floating point double
|
||||
double tdm_ripper::convert_double(std::vector<unsigned char> bych)
|
||||
{
|
||||
assert( bych.size() == sizeof(double) );
|
||||
assert( endianness_ );
|
||||
|
||||
// check for IEEE754 floating point standard
|
||||
assert( std::numeric_limits<double>::is_iec559 );
|
||||
|
||||
double df = 0.0;
|
||||
|
||||
uint8_t *dfcast = reinterpret_cast<uint8_t*>(&df);
|
||||
|
||||
for ( int i = 0; i < (int)sizeof(double); i++ )
|
||||
{
|
||||
dfcast[i] = (int)bych[i];
|
||||
}
|
||||
|
||||
return df;
|
||||
}
|
||||
|
||||
std::vector<double> tdm_ripper::convert_channel(int channelid)
|
||||
{
|
||||
// obtain offset, length of channel and size of datatype
|
||||
int byteoffset = byteoffset_[channelid];
|
||||
int length = length_[channelid];
|
||||
int typesize = datatypes_[type_[channelid]]/CHAR_BIT;
|
||||
|
||||
// declare resulting array
|
||||
std::vector<double> chann(length);
|
||||
|
||||
for ( int i = 0; i < length; i++ )
|
||||
{
|
||||
std::vector<unsigned char> cseg(tdxbuf_.begin()+byteoffset+i*typesize,
|
||||
tdxbuf_.begin()+byteoffset+(i+1)*typesize);
|
||||
|
||||
if ( type_[channelid].compare("eInt32Usi") == 0 )
|
||||
{
|
||||
chann[i] = convert_int(cseg);
|
||||
}
|
||||
else if ( type_[channelid].compare("eFloat64Usi") == 0 )
|
||||
{
|
||||
chann[i] = convert_double(cseg);
|
||||
}
|
||||
else
|
||||
{
|
||||
assert( false && "datatype not supported!" );
|
||||
}
|
||||
}
|
||||
|
||||
return chann;
|
||||
}
|
||||
|
||||
std::vector<double> tdm_ripper::get_channel(int channelid)
|
||||
{
|
||||
assert( channelid >= 0 && channelid < num_channels_ && "please provide valid channel id" );
|
||||
|
||||
std::vector<double> chann = convert_channel(channel_ext_[channelid]);
|
||||
|
||||
// check if converted value is within expected range
|
||||
for ( int i = 0; i < (int)chann.size(); i++ )
|
||||
{
|
||||
assert( chann[i] >= minmax_[channelid].first - 1.0e-6
|
||||
&& chann[i] <= minmax_[channelid].second + 1.0e-6 );
|
||||
}
|
||||
|
||||
return chann;
|
||||
}
|
||||
|
||||
void tdm_ripper::print_channel(int channelid, const char* filename, int width)
|
||||
{
|
||||
assert( channelid >= 0 && channelid < num_channels_ && "please provide valid channel id" );
|
||||
|
||||
std::ofstream fout(filename);
|
||||
|
||||
std::vector<double> channdat = get_channel(channelid);
|
||||
for ( auto el: channdat ) fout<<std::setw(width)<<el<<"\n";
|
||||
fout.close();
|
||||
}
|
||||
360
lib/tdm_ripper.hpp
Normal file
360
lib/tdm_ripper.hpp
Normal file
@ -0,0 +1,360 @@
|
||||
|
||||
#ifndef TDM_RIPPER
|
||||
#define TDM_RIPPER
|
||||
|
||||
#include <iostream>
|
||||
#include <fstream>
|
||||
#include <iterator>
|
||||
#include <vector>
|
||||
#include <iomanip>
|
||||
#include <stdlib.h>
|
||||
#include <assert.h>
|
||||
#include <map>
|
||||
#include <numeric>
|
||||
#include <algorithm>
|
||||
|
||||
#include "../pugixml/pugixml.hpp"
|
||||
|
||||
class tdm_ripper
|
||||
{
|
||||
// .tdm and .tdx filenames
|
||||
std::string tdmfile_;
|
||||
std::string tdxfile_;
|
||||
bool suppress_status_;
|
||||
|
||||
// endianness (true = little, false = big)
|
||||
bool endianness_, machine_endianness_;
|
||||
|
||||
// evtl. neglect groups with no actual channels
|
||||
bool neglect_empty_groups_;
|
||||
int num_empty_groups_;
|
||||
|
||||
// number/names/ids of channels, channelgroups and channels's assignment to groups
|
||||
int num_channels_, num_groups_;
|
||||
std::vector<std::string> channel_id_, inc_id_, units_, channel_name_;
|
||||
std::vector<std::string> group_id_, group_name_;
|
||||
std::vector<std::pair<std::string,std::string>> group_timestamp_;
|
||||
std::vector<int> num_channels_group_;
|
||||
std::vector<int> channels_group_;
|
||||
std::vector<int> channel_ext_;
|
||||
|
||||
// minimum/maximum value in particular channel (is provided in .tdm file as float)
|
||||
std::vector<std::pair<double,double>> minmax_;
|
||||
|
||||
// use xpointers and ids to assign channels to byteoffsets
|
||||
std::map<std::string,std::string> xml_local_columns_, xml_values_, xml_double_sequence_;
|
||||
|
||||
// byteoffset, length and datatype of channels
|
||||
std::vector<int> byteoffset_;
|
||||
std::vector<int> length_;
|
||||
std::vector<std::string> type_;
|
||||
std::vector<std::string> external_id_;
|
||||
|
||||
// mapping of NI datatype to size (in bytes) of type
|
||||
std::map<std::string, int> datatypes_;
|
||||
|
||||
// xml parser
|
||||
pugi::xml_document xml_doc_;
|
||||
pugi::xml_parse_result xml_result_;
|
||||
|
||||
// .tdm-file eventually contains some meta information (about measurement)
|
||||
std::map<std::string,std::string> root_info_;
|
||||
std::map<std::string,std::string> meta_info_;
|
||||
|
||||
// binary data container
|
||||
std::vector<unsigned char> tdxbuf_;
|
||||
|
||||
public:
|
||||
|
||||
tdm_ripper(std::string tdmfile, std::string tdxfile = "",
|
||||
bool suppress_status = true, bool neglect_empty_groups = true);
|
||||
|
||||
void parse_structure();
|
||||
|
||||
void list_channels(std::ostream& gout = std::cout, int width = 15, int maxshow = 50);
|
||||
void list_groups(std::ostream& gout = std::cout, int width = 15, int maxshow = 50);
|
||||
|
||||
void show_structure();
|
||||
|
||||
// count number of occurences of substring in string
|
||||
int count_occ_string(std::string s, std::string sub)
|
||||
{
|
||||
int num_occs = 0;
|
||||
std::string::size_type pos = 0;
|
||||
|
||||
while ( ( pos = s.find(sub,pos) ) != std::string::npos )
|
||||
{
|
||||
num_occs++;
|
||||
pos += sub.length();
|
||||
}
|
||||
|
||||
return num_occs;
|
||||
}
|
||||
|
||||
// obtain substring of 'entirestr' in between starting and stopping delimiter
|
||||
std::string get_str_between(std::string entirestr, std::string startlim, std::string stoplim)
|
||||
{
|
||||
std::size_t apos = entirestr.find(startlim);
|
||||
std::size_t bpos = entirestr.find_last_of(stoplim);
|
||||
assert( apos != std::string::npos && bpos != std::string::npos );
|
||||
return entirestr.substr(apos+startlim.length(),bpos-(apos+startlim.length()));
|
||||
}
|
||||
|
||||
void print_hash_local(const char* filename, int width = 20)
|
||||
{
|
||||
std::ofstream fout(filename);
|
||||
|
||||
std::map<std::string,std::string>::iterator it;
|
||||
int count = 0;
|
||||
for ( it = xml_local_columns_.begin(); it != xml_local_columns_.end(); it++ )
|
||||
{
|
||||
count++;
|
||||
fout<<std::setw(width)<<count;
|
||||
fout<<std::setw(width)<<it->first;
|
||||
fout<<std::setw(width)<<it->second;
|
||||
fout<<"\n";
|
||||
}
|
||||
fout.close();
|
||||
}
|
||||
|
||||
void print_hash_values(const char* filename, int width = 20)
|
||||
{
|
||||
std::ofstream fout(filename);
|
||||
|
||||
std::map<std::string,std::string>::iterator it;
|
||||
int count = 0;
|
||||
for ( it = xml_values_.begin(); it != xml_values_.end(); it++ )
|
||||
{
|
||||
count++;
|
||||
fout<<std::setw(width)<<count;
|
||||
fout<<std::setw(width)<<it->first;
|
||||
fout<<std::setw(width)<<it->second;
|
||||
fout<<"\n";
|
||||
}
|
||||
fout.close();
|
||||
}
|
||||
|
||||
void print_hash_double(const char* filename, int width = 20)
|
||||
{
|
||||
std::ofstream fout(filename);
|
||||
|
||||
std::map<std::string,std::string>::iterator it;
|
||||
int count = 0;
|
||||
for ( it = xml_double_sequence_.begin(); it != xml_double_sequence_.end(); it++ )
|
||||
{
|
||||
count++;
|
||||
fout<<std::setw(width)<<count;
|
||||
fout<<std::setw(width)<<it->first;
|
||||
fout<<std::setw(width)<<it->second;
|
||||
fout<<"\n";
|
||||
}
|
||||
fout.close();
|
||||
}
|
||||
|
||||
void print_extid(const char* filename, int width = 20)
|
||||
{
|
||||
std::ofstream fout(filename);
|
||||
|
||||
int count = 0;
|
||||
for ( auto extid: channel_ext_ )
|
||||
{
|
||||
count++;
|
||||
fout<<std::setw(width)<<count;
|
||||
fout<<std::setw(width)<<extid;
|
||||
fout<<"\n";
|
||||
}
|
||||
fout.close();
|
||||
}
|
||||
|
||||
// provide number of channels and group
|
||||
const int& num_channels()
|
||||
{
|
||||
return num_channels_;
|
||||
}
|
||||
const int& num_groups()
|
||||
{
|
||||
return num_groups_;
|
||||
}
|
||||
|
||||
// get number of channels in specific group
|
||||
const int& no_channels(int groupid)
|
||||
{
|
||||
assert( groupid >= 0 && groupid < num_groups_ );
|
||||
|
||||
return num_channels_group_[groupid];
|
||||
}
|
||||
|
||||
const std::string& channel_name(int channelid)
|
||||
{
|
||||
assert( channelid >= 0 && channelid < num_channels_ );
|
||||
|
||||
return channel_name_[channelid];
|
||||
}
|
||||
|
||||
// obtain overall channel id from combined group and group-specific channel id
|
||||
int obtain_channel_id(int groupid, int channelid)
|
||||
{
|
||||
assert( groupid >= 0 && groupid < num_groups_ );
|
||||
assert( channelid >= 0 && channelid < num_channels_group_[groupid] );
|
||||
|
||||
// find cummulative number of channels
|
||||
int numsum = 0;
|
||||
for ( int i = 0; i < groupid; i++ )
|
||||
{
|
||||
numsum += num_channels_group_[i];
|
||||
}
|
||||
assert( (numsum + channelid) > 0 && (numsum + channelid) <= num_channels_ );
|
||||
|
||||
return numsum+channelid;
|
||||
}
|
||||
|
||||
const std::string& channel_name(int groupid, int channelid)
|
||||
{
|
||||
return channel_name_[obtain_channel_id(groupid,channelid)];
|
||||
}
|
||||
|
||||
const std::string& group_name(int groupid)
|
||||
{
|
||||
assert( groupid >= 0 && groupid < num_groups_ );
|
||||
|
||||
return group_name_[groupid];
|
||||
}
|
||||
|
||||
const std::string& channel_unit(int groupid, int channelid)
|
||||
{
|
||||
return units_[obtain_channel_id(groupid,channelid)];
|
||||
}
|
||||
|
||||
int channel_exists(int groupid, std::string channel_name)
|
||||
{
|
||||
assert( groupid >= 0 && groupid < num_groups_ );
|
||||
|
||||
int channelid = -1;
|
||||
for ( int i = 0; i < num_channels_group_[groupid]; i++)
|
||||
{
|
||||
if ( comparestrings(channel_name_[obtain_channel_id(groupid,i)],channel_name) )
|
||||
{
|
||||
channelid = i;
|
||||
}
|
||||
}
|
||||
return channelid;
|
||||
}
|
||||
|
||||
bool comparestrings(std::string s1, std::string s2, bool case_sensitive = false)
|
||||
{
|
||||
if ( case_sensitive )
|
||||
{
|
||||
return ( s1.compare(s2) == 0 );
|
||||
}
|
||||
else
|
||||
{
|
||||
std::transform( s1.begin(), s1.end(), s1.begin(), ::tolower);
|
||||
std::transform( s2.begin(), s2.end(), s2.begin(), ::tolower);
|
||||
return ( s1.compare(s2) == 0 );
|
||||
}
|
||||
}
|
||||
|
||||
// get time-stamp of channel-group in .tdm file given in unix format
|
||||
static std::string unix_timestamp(std::string unixts)
|
||||
{
|
||||
// average year of Gregorian calender
|
||||
const double avgdaysofyear = 365.0 + 1./4 - 1./100 + 1./400
|
||||
- 8./24561; // gauge timestamp according to DIADEM result
|
||||
|
||||
// convert string to long int = number of seconds since 0000/01/01 00:00
|
||||
long int ts = atol(unixts.c_str());
|
||||
assert( ts >= 0 );
|
||||
|
||||
// use STL to convert timestamp (epoch usually starts on 01.01.1970)
|
||||
std::time_t tstime = ts - 1970*avgdaysofyear*86400;
|
||||
|
||||
// get rid of linebreak character and return the result
|
||||
return strtok(std::ctime(&tstime),"\n");
|
||||
}
|
||||
|
||||
std::string time_stamp(int groupid, bool startstop = true)
|
||||
{
|
||||
assert( groupid >= 0 && groupid < num_groups_ );
|
||||
|
||||
return startstop ? unix_timestamp(group_timestamp_[groupid].first)
|
||||
: unix_timestamp(group_timestamp_[groupid].second);
|
||||
}
|
||||
|
||||
void list_datatypes();
|
||||
|
||||
// convert array of chars to single integer or floating point double
|
||||
int convert_int(std::vector<unsigned char> bych);
|
||||
double convert_double(std::vector<unsigned char> bych);
|
||||
|
||||
// disassemble single integer or double into array of chars
|
||||
std::vector<unsigned char> convert_int(int number);
|
||||
std::vector<unsigned char> convert_double(double number);
|
||||
|
||||
// convert entire channel, i.e. expert of .tdx binary file
|
||||
// std::vector<double> convert_channel(int byteoffset, int length, int typesize);
|
||||
std::vector<double> convert_channel(int channelid);
|
||||
|
||||
// obtain channel from overall channel id...
|
||||
std::vector<double> get_channel(int channelid);
|
||||
// ...or from group id and group-specific channel id
|
||||
std::vector<double> channel(int groupid, int channelid)
|
||||
{
|
||||
return get_channel(obtain_channel_id(groupid,channelid));
|
||||
}
|
||||
|
||||
int channel_length(int groupid, int channelid)
|
||||
{
|
||||
return length_[channel_ext_[obtain_channel_id(groupid,channelid)]];
|
||||
}
|
||||
|
||||
double get_min(int groupid, int channelid)
|
||||
{
|
||||
return minmax_[obtain_channel_id(groupid,channelid)].first;
|
||||
}
|
||||
double get_max(int groupid, int channelid)
|
||||
{
|
||||
return minmax_[obtain_channel_id(groupid,channelid)].second;
|
||||
}
|
||||
|
||||
void print_channel(int channelid, const char* filename, int width = 15);
|
||||
|
||||
// obtain any meta information about .tdm-file if available
|
||||
std::string get_meta(std::string attribute_name)
|
||||
{
|
||||
// check if key "attribute_name" actually exits
|
||||
std::map<std::string,std::string>::iterator positer = meta_info_.find(attribute_name);
|
||||
bool ispresent = ( positer == meta_info_.end() ) ? false : true;
|
||||
|
||||
return ispresent ? meta_info_[attribute_name] : "key does not exist";
|
||||
}
|
||||
|
||||
// prepare meta information file including all available meta-data
|
||||
void print_meta(const char* filename, std::string sep = ",")
|
||||
{
|
||||
// open file
|
||||
std::ofstream fout(filename);
|
||||
|
||||
for ( const auto& it : root_info_ )
|
||||
{
|
||||
fout<<it.first<<sep<<it.second<<"\n";
|
||||
}
|
||||
fout<<sep<<"\n";
|
||||
for ( const auto& it : meta_info_ )
|
||||
{
|
||||
fout<<it.first<<sep<<it.second<<"\n";
|
||||
}
|
||||
|
||||
// close down file
|
||||
fout.close();
|
||||
}
|
||||
|
||||
// TODO add elements/methods to build .tdm and write .tdx files for your own data
|
||||
// by constructing xml document tree and write data to binary .tdx
|
||||
// void set_channels(std::vector<std::string> channels);
|
||||
// void set_groups(std::vector<std::string> groups);
|
||||
// void set_assigment(std::vector<int> assignment);
|
||||
// void set_channel(int i, std::vector<double> data);
|
||||
|
||||
};
|
||||
|
||||
#endif
|
||||
1090
lib/tdm_termite.cpp
1090
lib/tdm_termite.cpp
File diff suppressed because it is too large
Load Diff
@ -1,290 +0,0 @@
|
||||
// ------------------------------------------------------------------------- //
|
||||
|
||||
#ifndef TDM_TERMITE
|
||||
#define TDM_TERMITE
|
||||
|
||||
#include <iostream>
|
||||
#include <fstream>
|
||||
#include <iterator>
|
||||
#include <vector>
|
||||
#include <iomanip>
|
||||
#include <stdlib.h>
|
||||
#include <assert.h>
|
||||
#include <map>
|
||||
#include <numeric>
|
||||
#include <algorithm>
|
||||
#include <chrono>
|
||||
#include <sstream>
|
||||
#include <filesystem>
|
||||
#include <regex>
|
||||
|
||||
#include "pugixml.hpp"
|
||||
#include "tdm_datamodel.hpp"
|
||||
#include "tdm_datatype.hpp"
|
||||
|
||||
// -------------------------------------------------------------------------- //
|
||||
|
||||
class tdm_termite
|
||||
{
|
||||
// .tdm and .tdx paths/filenames
|
||||
std::string tdmfile_;
|
||||
std::string tdxfile_;
|
||||
|
||||
// set of .csv files (encoding mode)
|
||||
std::vector<std::string> csvfile_;
|
||||
|
||||
// endianness (true = little, false = big)
|
||||
bool endianness_, machine_endianness_;
|
||||
|
||||
// tdm meta-data
|
||||
tdm_meta meta_data_;
|
||||
|
||||
// resconstruct "tdm_datatype.hpp: tdm_datatypes" as map to quickly map
|
||||
// "valueType"/"channel_datatype" to full datatype
|
||||
std::map<std::string,tdm_datatype> tdmdt_name_, tdmdt_chan_;
|
||||
|
||||
// blocks of data in .tdx file
|
||||
std::map<std::string,block> tdx_blocks_;
|
||||
|
||||
// tdm root
|
||||
tdm_root tdmroot_;
|
||||
|
||||
// tdm channelgroups
|
||||
std::map<std::string,tdm_channelgroup> tdmchannelgroups_;
|
||||
|
||||
// tdm channels
|
||||
std::map<std::string,tdm_channel> tdmchannels_;
|
||||
std::map<std::string,std::vector<tdm_datatype>> tdmchannels_data_;
|
||||
|
||||
// submatrices and local_columns
|
||||
std::map<std::string,submatrix> submatrices_;
|
||||
std::map<std::string,localcolumn> localcolumns_;
|
||||
|
||||
// binary data container/file stream
|
||||
std::vector<unsigned char> tdxbuffer_;
|
||||
std::ifstream *tdx_ifstream_;
|
||||
|
||||
// find machine's endianness at runtime
|
||||
// detect machine endianness (C++20 !!)
|
||||
// if ( std::endian::native == std::endian::little )
|
||||
// {
|
||||
// machine_endianness_ = true;
|
||||
// }
|
||||
// else if ( std::endian::native == std::endian::big )
|
||||
// {
|
||||
// machine_endianness_ = false;
|
||||
// }
|
||||
// else
|
||||
// {
|
||||
// throw std::runtime_error("mixed endianness architecture is not supported");
|
||||
// }
|
||||
bool detect_endianness()
|
||||
{
|
||||
// int num = 1;
|
||||
// machine_endianness_ = ( *(char*)&num == 1 );
|
||||
std::uint32_t num = 0x11223344;
|
||||
uint8_t* dfc = reinterpret_cast<uint8_t*>(&num);
|
||||
return ( dfc[0] == 0x44 );
|
||||
}
|
||||
|
||||
// extract list of identifiers from e.g. "#xpointer(id("usi12") id("usi13"))"
|
||||
std::vector<std::string> extract_ids(std::string idstring)
|
||||
{
|
||||
// collect group identifiers by means of regex pattern "usi[0-9]+"
|
||||
std::regex regid("(usi[0-9]+)");
|
||||
|
||||
// declare match instance and regex iterator (to find ALL matches)
|
||||
std::smatch usi_match;
|
||||
std::sregex_iterator pos(idstring.begin(), idstring.end(), regid);
|
||||
std::sregex_iterator end;
|
||||
|
||||
// iterate through all matches
|
||||
std::vector<std::string> listofids;
|
||||
for ( ; pos != end; ++pos) listofids.push_back(pos->str());
|
||||
|
||||
return listofids;
|
||||
}
|
||||
|
||||
// split string into substrings by delimiting string
|
||||
std::vector<std::string> split(std::string fullstring, std::string delstr)
|
||||
{
|
||||
// declare array of resulting strings
|
||||
std::vector<std::string> splitstrings(0);
|
||||
|
||||
// parse input string for substring
|
||||
while ( fullstring.find(delstr) != std::string::npos )
|
||||
{
|
||||
// find first occurence of delimiting string in 'mystring'
|
||||
std::size_t delpos = fullstring.find(delstr);
|
||||
|
||||
// extract substring
|
||||
std::string stringel = fullstring.substr(0,delpos);
|
||||
|
||||
// append first word to array
|
||||
if ( !stringel.empty() )
|
||||
{
|
||||
splitstrings.push_back(stringel);
|
||||
}
|
||||
|
||||
// remove first word from 'fullstring'
|
||||
fullstring = fullstring.substr(delpos+delstr.size(),fullstring.size());
|
||||
}
|
||||
|
||||
// append last word to array
|
||||
splitstrings.push_back(fullstring);
|
||||
|
||||
return splitstrings;
|
||||
}
|
||||
|
||||
public:
|
||||
|
||||
// encoding
|
||||
// tdm_termite(std::vector<std::string> csvfile);
|
||||
|
||||
// decoding
|
||||
tdm_termite();
|
||||
tdm_termite(std::string tdmfile, std::string tdxfile = std::string(""),
|
||||
bool showlog = false);
|
||||
~tdm_termite();
|
||||
tdm_termite(const tdm_termite& other);
|
||||
tdm_termite& operator=(const tdm_termite& other);
|
||||
|
||||
// provide (tdm,tdx) files
|
||||
void submit_files(std::string tdmfile, std::string tdxfile = std::string(""),
|
||||
bool showlog = false);
|
||||
|
||||
// process TDM data model in tdm file
|
||||
void process_tdm(bool showlog);
|
||||
|
||||
// process <usi:include> element
|
||||
void process_include(bool showlog, pugi::xml_document& xml_doc);
|
||||
|
||||
// extract tdm_root
|
||||
void process_root(bool showlog, pugi::xml_document& xml_doc);
|
||||
|
||||
// process/list all channels and groups
|
||||
void process_channelgroups(bool showlog, pugi::xml_document& xml_doc);
|
||||
void process_channels(bool showlog, pugi::xml_document& xml_doc);
|
||||
|
||||
// process submatrices and localcolumns
|
||||
void process_submatrices(bool showlog, pugi::xml_document& xml_doc);
|
||||
void process_localcolumns(bool showlog, pugi::xml_document& xml_doc);
|
||||
|
||||
// get meta-data
|
||||
tdm_meta get_meta()
|
||||
{
|
||||
return meta_data_;
|
||||
}
|
||||
|
||||
// get root element
|
||||
tdm_root get_root()
|
||||
{
|
||||
return tdmroot_;
|
||||
}
|
||||
|
||||
// get channel/channelgroup meta object
|
||||
tdm_channel& channel(std::string channelid)
|
||||
{
|
||||
if ( tdmchannels_.count(channelid) == 1 ) {
|
||||
return tdmchannels_.at(channelid);
|
||||
} else {
|
||||
throw std::runtime_error(std::string("channel does not exist: ") + channelid);
|
||||
}
|
||||
}
|
||||
tdm_channelgroup& channelgroup(std::string groupid)
|
||||
{
|
||||
if ( tdmchannelgroups_.count(groupid) == 1 ) {
|
||||
return tdmchannelgroups_.at(groupid);
|
||||
} else {
|
||||
throw std::runtime_error(std::string("channelgroup does not exist: ") + groupid);
|
||||
}
|
||||
}
|
||||
|
||||
// get full channel(group) overview
|
||||
std::string get_channel_overview(format chformatter);
|
||||
|
||||
// get block/submatrix/localcolumn overview
|
||||
template<typename tdmelement>
|
||||
std::string get_overview(format formatter);
|
||||
private:
|
||||
void summarize_member(tdm_channelgroup &chp, std::string& summary, format& formatter);
|
||||
void summarize_member(submatrix &sbm, std::string& summary, format& formatter);
|
||||
void summarize_member(localcolumn &lcc, std::string& summary, format& formatter);
|
||||
void summarize_member(block &blk, std::string& summary, format& formatter);
|
||||
public:
|
||||
|
||||
// get list of channelgroup ids
|
||||
std::vector<std::string> get_channelgroup_ids()
|
||||
{
|
||||
std::vector<std::string> channelgroup_ids;
|
||||
for (std::map<std::string,tdm_channelgroup>::iterator it=tdmchannelgroups_.begin();
|
||||
it!=tdmchannelgroups_.end(); ++it) channelgroup_ids.push_back(it->first);
|
||||
|
||||
return channelgroup_ids;
|
||||
}
|
||||
|
||||
// get list of channel ids
|
||||
std::vector<std::string> get_channel_ids()
|
||||
{
|
||||
std::vector<std::string> channel_ids;
|
||||
for (std::map<std::string,tdm_channel>::iterator it=tdmchannels_.begin();
|
||||
it!=tdmchannels_.end(); ++it) channel_ids.push_back(it->first);
|
||||
|
||||
return channel_ids;
|
||||
}
|
||||
|
||||
// extract channel by id
|
||||
std::vector<tdmdatatype> get_channel(std::string& id);
|
||||
|
||||
// additional methods for Cython/Python compatibiliy
|
||||
//
|
||||
// extract and return any channel as datatype double
|
||||
std::vector<double> get_channel_as_double(std::string id)
|
||||
{
|
||||
std::vector<tdmdatatype> tdmchn = this->get_channel(id);
|
||||
std::vector<double> chn;
|
||||
for ( tdmdatatype el: tdmchn ) chn.push_back(el.as_double());
|
||||
return chn;
|
||||
}
|
||||
// get channel(-group) meta-data
|
||||
std::string get_channelgroup_info(std::string id)
|
||||
{
|
||||
if ( tdmchannelgroups_.count(id) == 1 ) {
|
||||
return tdmchannelgroups_.at(id).get_json();
|
||||
} else {
|
||||
throw std::runtime_error(std::string("channelgroup does not exist: ") + id);
|
||||
}
|
||||
}
|
||||
std::string get_channel_info(std::string id)
|
||||
{
|
||||
if ( tdmchannels_.count(id) == 1 ) {
|
||||
return tdmchannels_.at(id).get_json();
|
||||
} else {
|
||||
throw std::runtime_error(std::string("channel does not exist: ") + id);
|
||||
}
|
||||
}
|
||||
|
||||
// dump a single channel/entire group (identified by id) to file
|
||||
void print_channel(std::string &id, const char* filename, bool include_meta = true);
|
||||
void print_group(std::string &id, const char* filename, bool include_meta = true,
|
||||
char sep = ' ', std::string column_header = std::string(""));
|
||||
void check_filename_path(const char* filename);
|
||||
|
||||
// check machine's datatypes
|
||||
// https://en.cppreference.com/w/cpp/language/types
|
||||
void check_local_datatypes();
|
||||
|
||||
private:
|
||||
|
||||
template<typename datatype>
|
||||
void convert_data_to_type(std::vector<unsigned char> &buffer,
|
||||
std::vector<tdmdatatype> &channel);
|
||||
|
||||
// check consistency of mapped datatypes between C++ and TDM datatypes
|
||||
void check_datatype_consistency();
|
||||
|
||||
};
|
||||
|
||||
#endif
|
||||
|
||||
// -------------------------------------------------------------------------- //
|
||||
70
main.cpp
Normal file
70
main.cpp
Normal file
@ -0,0 +1,70 @@
|
||||
|
||||
|
||||
#include "lib/tdm_ripper.hpp"
|
||||
|
||||
int main(int argc, char* argv[])
|
||||
{
|
||||
// path of filename provided ?
|
||||
assert( argc > 1 && "please provide a filename and path" );
|
||||
|
||||
std::cout<<"number of CLI-arguments: "<<argc<<"\n";
|
||||
for ( int i = 0; i < argc; i++ ) std::cout<<std::setw(5)<<i<<": "<<argv[i]<<"\n";
|
||||
|
||||
// declare and initialize tdm_ripper
|
||||
assert( argc == 3 );
|
||||
tdm_ripper ripper(argv[1],argv[2],false); //,"samples/SineData.tdx",false);
|
||||
|
||||
// ripper.list_datatypes();
|
||||
// ripper.show_structure();
|
||||
|
||||
ripper.print_hash_local("data/hash_table_xml_local.dat");
|
||||
ripper.print_hash_values("data/hash_table_xml_value.dat");
|
||||
ripper.print_hash_double("data/hash_table_xml_double.dat");
|
||||
ripper.print_extid("data/channel_ext_id.dat");
|
||||
|
||||
ripper.list_groups();
|
||||
std::ofstream gout("data/list_of_groups.dat");
|
||||
ripper.list_groups(gout);
|
||||
gout.close();
|
||||
|
||||
ripper.list_channels();
|
||||
std::ofstream fout("data/list_of_channels.dat");
|
||||
ripper.list_channels(fout);
|
||||
fout.close();
|
||||
|
||||
// long int nsa = 6.3636349745e10; // expected result: 22.07.2016, 19:49:05
|
||||
// long int nsb = 6.3636350456e10;
|
||||
// std::string ts = std::to_string(nsa);
|
||||
// std::cout<<ripper.unix_timestamp(ts)<<"\n";
|
||||
|
||||
std::cout<<"number of channels "<<ripper.num_channels()<<"\n";
|
||||
std::cout<<"number of groups "<<ripper.num_groups()<<"\n\n";
|
||||
|
||||
// obtain some specific meta information tags
|
||||
std::cout<<"\n"<<ripper.get_meta("SMP_Name")<<"\n";
|
||||
std::cout<<ripper.get_meta("SMP_Aufbau_Nr")<<"\n";
|
||||
std::cout<<ripper.get_meta("SMP_Type")<<"\n";
|
||||
std::cout<<ripper.get_meta("Location")<<"\n\n";
|
||||
|
||||
// print all meta information
|
||||
ripper.print_meta("data/meta_info.csv");
|
||||
|
||||
// for ( int i = 0; i < ripper.num_groups(); i++ )
|
||||
// {
|
||||
// std::cout<<std::setw(10)<<i+1<<std::setw(10)<<ripper.no_channels(i+1)<<"\n";
|
||||
// for ( int j = 0; j < ripper.no_channels(i+1); j++ )
|
||||
// {
|
||||
// std::cout<<std::setw(10)<<i+1<<std::setw(10)<<j+1<<std::setw(30)<<ripper.channel_name(i+1,j+1)<<"\n";
|
||||
// }
|
||||
// }
|
||||
|
||||
// for ( int i = 3; i < 10; i++ )
|
||||
for ( int i = 0; i < ripper.num_channels(); i++ )
|
||||
// for ( int i = 11880; i < ripper.num_channels(); i++ )
|
||||
{
|
||||
ripper.print_channel(i,("data/channel_"+std::to_string(i+1)+"_"
|
||||
+ripper.channel_name(i)+".dat").c_str());
|
||||
}
|
||||
|
||||
return 0;
|
||||
}
|
||||
157
makefile
157
makefile
@ -1,136 +1,47 @@
|
||||
# --------------------------------------------------------------------------- #
|
||||
|
||||
SHELL := /bin/bash
|
||||
|
||||
# declare name of executable
|
||||
EXE = tdmtermite
|
||||
EXE = tdm_parser
|
||||
CC = g++ -std=c++11
|
||||
# -stdlib=libc++
|
||||
CPPFLAGS = -O3 -Wall -Werror -Wunused-variable -Wsign-compare
|
||||
LIB = pugixml/
|
||||
|
||||
# sources and headers
|
||||
SRC := tdm_termite
|
||||
HPP = $(wildcard lib/*.hpp)
|
||||
$(EXE) : main.o tdm_ripper.o
|
||||
$(CC) $(CPPFLAGS) $^ -o $@
|
||||
|
||||
# compiler and C++ standard
|
||||
CC = g++ -std=c++17
|
||||
main.o : main.cpp
|
||||
$(CC) -c $(CPPFLAGS) -I $(LIB) $< -o $@
|
||||
|
||||
# compiler options and optimization flags
|
||||
OPT = -O3 -Wall -Wconversion -Wpedantic -Wunused-variable -Wsign-compare
|
||||
tdm_ripper.o : lib/tdm_ripper.cpp lib/tdm_ripper.hpp
|
||||
$(CC) -c $(CPPFLAGS) -I $(LIB) $< -o $@
|
||||
|
||||
# include 3rd party libraries paths
|
||||
LIBB := 3rdparty/
|
||||
LIB := $(foreach dir,$(shell ls $(LIBB)),-I $(LIBB)$(dir))
|
||||
extall : extract_all.o tdm_ripper.o
|
||||
$(CC) $(CPPFLAGS) $^ -o extract_all
|
||||
|
||||
# determine git version/commit tag
|
||||
GTAG := $(shell git tag -l --sort=version:refname | tail -n1 | sed "s/$^v//g")
|
||||
GHSH := $(shell git rev-parse HEAD | head -c8)
|
||||
GVSN := $(shell cat python/VERSION | tr -d ' \n')
|
||||
extract_all.o : extract_all.cpp
|
||||
$(CC) -c $(CPPFLAGS) -I $(LIB) $< -o $@
|
||||
|
||||
# current timestamp
|
||||
TMS = $(shell date +%Y%m%dT%H%M%S)
|
||||
clean :
|
||||
rm -f $(EXE) *.o
|
||||
rm -f *.dat
|
||||
rm -f extract_all
|
||||
rm -f data/*.dat
|
||||
rm -f data/*.csv
|
||||
|
||||
# define install location
|
||||
INST := /usr/local/bin
|
||||
pylib : setup.py pytdm_ripper.pyx tdm_ripper.pxd tdm_ripper.o
|
||||
python3 setup.py build_ext --inplace
|
||||
|
||||
# platform and current working directory
|
||||
OST := $(shell uname)
|
||||
CWD := $(shell pwd)
|
||||
install : setup.py pytdm_ripper.pyx tdm_ripper.pxd lib/tdm_ripper.cpp lib/tdm_ripper.hpp
|
||||
python3 setup.py install
|
||||
|
||||
# --------------------------------------------------------------------------- #
|
||||
# C++ and CLI tool
|
||||
install_osx : setup_osx.py pytdm_ripper.pyx tdm_ripper.pxd lib/tdm_ripper.cpp lib/tdm_ripper.hpp
|
||||
python3 setup_osx.py install
|
||||
|
||||
# check tags and build executable
|
||||
exec: check-tags $(GVSN) $(EXE)
|
||||
lib/libtdmripper.a :
|
||||
make -C lib libtdmripper.a
|
||||
|
||||
# build executable
|
||||
$(EXE): $(SRC).o main.o
|
||||
$(CC) $(OPT) $^ -o $@
|
||||
|
||||
$(SRC).o : lib/$(SRC).cpp lib/$(SRC).hpp $(HPP)
|
||||
$(CC) -c $(OPT) $(LIB) $< -o $@
|
||||
|
||||
# build main.cpp object file and include git version/commit tag
|
||||
main.o: src/main.cpp lib/$(SRC).hpp $(HPP)
|
||||
@cp $< $<.cpp
|
||||
@if [ $(OST) = "Linux" ]; then\
|
||||
sed -i 's/TAGSTRING/$(GTAG)/g' $<.cpp; \
|
||||
sed -i 's/HASHSTRING/$(GHSH)/g' $<.cpp; \
|
||||
sed -i 's/TIMESTAMPSTRING/$(TMS)/g' $<.cpp; \
|
||||
fi
|
||||
@if [ $(OST) = "Darwin" ]; then\
|
||||
sed -i '' 's/TAGSTRING/$(GTAG)/g' $<.cpp; \
|
||||
sed -i '' 's/HASHSTRING/$(GHSH)/g' $<.cpp; \
|
||||
sed -i '' 's/TIMESTAMPSTRING/$(TMS)/g' $<.cpp; \
|
||||
fi
|
||||
$(CC) -c $(OPT) $(LIB) -I lib/ $<.cpp -o $@
|
||||
@rm $<.cpp
|
||||
|
||||
install: $(EXE)
|
||||
cp $< $(INST)/
|
||||
|
||||
uninstall : $(INST)/$(EXE)
|
||||
rm $<
|
||||
|
||||
tdmtest : tdmtest.o
|
||||
$(CC) $(OPT) $^ -o $@
|
||||
|
||||
tdmtest.o : src/test.cpp lib/$(SRC).hpp $(HPP)
|
||||
$(CC) -c $(OPT) $(LIB) -I lib/ $< -o $@
|
||||
|
||||
cpp-clean :
|
||||
rm -vf $(EXE)
|
||||
rm -vf *.o src/main.cpp.cpp tdmtest
|
||||
|
||||
#-----------------------------------------------------------------------------#
|
||||
# versions
|
||||
|
||||
$(GTAG):
|
||||
@echo "consistent versions check successful: building $(GTAG)"
|
||||
|
||||
check-tags:
|
||||
@echo "latest git tag: $(GTAG)"
|
||||
@echo "latest git hash: $(GHSH)"
|
||||
@echo "python version: $(GVSN)"
|
||||
|
||||
# --------------------------------------------------------------------------- #
|
||||
# docker
|
||||
|
||||
docker-build:
|
||||
docker build . --tag tdmtermite:latest
|
||||
|
||||
docker-run:
|
||||
mkdir -pv data/{input,output}
|
||||
docker run -it --rm --volume $(CWD)/data:/home/data tdmtermite:latest /bin/bash
|
||||
|
||||
docker-clean:
|
||||
rm -rv data
|
||||
docker image remove tdmtermite
|
||||
|
||||
# --------------------------------------------------------------------------- #
|
||||
# check process
|
||||
|
||||
checkps :
|
||||
@ps aux | head -n1
|
||||
@ps aux | grep $(EXE) | grep -v "grep"
|
||||
|
||||
# --------------------------------------------------------------------------- #
|
||||
# python
|
||||
|
||||
python-build: check-tags $(GVSN)
|
||||
make -C python/ build-inplace
|
||||
cp python/TDMtermite*.so ./ -v
|
||||
|
||||
python-install: check-tags $(GVSN)
|
||||
make -C python/ install
|
||||
|
||||
python-clean:
|
||||
make -C python/ clean
|
||||
rm -vf TDMtermite*.so
|
||||
|
||||
python-test:
|
||||
PYTHONPATH=./ python python/examples/usage.py
|
||||
|
||||
# --------------------------------------------------------------------------- #
|
||||
# clean
|
||||
|
||||
clean : cpp-clean python-clean
|
||||
|
||||
# --------------------------------------------------------------------------- #
|
||||
clean-lib :
|
||||
rm -f lib/*.o lib/*.a
|
||||
rm -f -r build
|
||||
rm -f pytdm_ripper.cpp
|
||||
rm -f *.so
|
||||
|
||||
142
pytdm_ripper.pyx
Normal file
142
pytdm_ripper.pyx
Normal file
@ -0,0 +1,142 @@
|
||||
|
||||
from tdm_ripper cimport tdm_ripper
|
||||
import numpy as np
|
||||
import re
|
||||
|
||||
cdef class pytdmripper:
|
||||
|
||||
# pointer to C++ instance (since there's no nullary constructor)
|
||||
cdef tdm_ripper *cripp
|
||||
|
||||
def __cinit__(self, string tdmfile, string tdxfile = b""):
|
||||
self.cripp = new tdm_ripper(tdmfile,tdxfile)
|
||||
|
||||
def __dealloc__(self):
|
||||
del self.cripp
|
||||
|
||||
def show_channels(self):
|
||||
self.cripp.list_channels()
|
||||
|
||||
def show_groups(self):
|
||||
self.cripp.list_groups()
|
||||
|
||||
def num_channels(self):
|
||||
return self.cripp.num_channels()
|
||||
|
||||
def no_channels(self, int groupid):
|
||||
assert (groupid >= 0 and groupid < self.cripp.num_groups()), "index of group must be in [0,n-1]"
|
||||
return self.cripp.no_channels(groupid)
|
||||
|
||||
def num_groups(self):
|
||||
return self.cripp.num_groups()
|
||||
|
||||
def no_channel_groups(self):
|
||||
return self.cripp.num_groups()
|
||||
|
||||
def channel_name(self,int groupid,int channelid):
|
||||
return self.cripp.channel_name(groupid,channelid).decode('utf-8')
|
||||
|
||||
def group_name(self,int groupid):
|
||||
return self.cripp.group_name(groupid).decode('utf-8')
|
||||
|
||||
def channel_unit(self,int groupid,int channelid):
|
||||
return (self.cripp.channel_unit(groupid,channelid))
|
||||
|
||||
def channel_exists(self,int groupid, string channelname):
|
||||
return self.cripp.channel_exists(groupid,channelname)
|
||||
|
||||
def obtain_channel_id(self,int groupid, int channelid):
|
||||
return self.cripp.obtain_channel_id(groupid,channelid)
|
||||
|
||||
def get_channel(self, int channelid):
|
||||
return np.asarray(self.cripp.get_channel(channelid))
|
||||
|
||||
def channel(self,int groupid,int channelid):
|
||||
return self.cripp.channel(groupid,channelid)
|
||||
|
||||
def channel_length(self,int groupid, int channelid):
|
||||
return self.cripp.channel_length(groupid,channelid)
|
||||
|
||||
def time_stamp(self,int groupid, bool startstop):
|
||||
return self.cripp.time_stamp(groupid,startstop)
|
||||
|
||||
def get_min(self,int groupid, int channelid):
|
||||
return self.cripp.get_min(groupid,channelid)
|
||||
|
||||
def get_max(self,int groupid, int channelid):
|
||||
return self.cripp.get_max(groupid,channelid)
|
||||
|
||||
def print_channel(self, int channelid, const char* filename):
|
||||
self.cripp.print_channel(channelid,filename)
|
||||
|
||||
def meta_info(self, string attribute_name):
|
||||
return self.cripp.get_meta(attribute_name)
|
||||
|
||||
def print_meta(self, const char* filename):
|
||||
self.cripp.print_meta(filename)
|
||||
|
||||
def close(self):
|
||||
dummy = ""
|
||||
|
||||
#=============================================================================#
|
||||
|
||||
def extract_all(string tdmfile, string tdxfile, string outdirx = b"./", string prfxnam = b""):
|
||||
"""
|
||||
Python function extracting all available data from .tdm and .tdx to .csv dump
|
||||
|
||||
Args:
|
||||
tdmfile: path and filename of .tdm file
|
||||
tdxfile: path and filename of associated .tdx file
|
||||
outdirx: directory where all .csv output is dumped
|
||||
prfxnam: optionally specify a name prefix for all .csv files
|
||||
|
||||
Return:
|
||||
None
|
||||
"""
|
||||
|
||||
# TODO preliminary: assume utf-8
|
||||
encoding = 'utf-8'
|
||||
|
||||
# set up instance of Cython ripper
|
||||
td = pytdmripper(tdmfile,tdxfile)
|
||||
|
||||
# if no name prefix is given, .tdm filename will be used
|
||||
prfx = ""
|
||||
if prfxnam.decode(encoding) == prfx :
|
||||
prfx = tdmfile.decode(encoding).rstrip('.tdm').split('/')[-1]
|
||||
else:
|
||||
prfx = prfxnam.decode(encoding)
|
||||
|
||||
# obtain number of available groups and channels
|
||||
numgr = td.num_groups()
|
||||
numch = td.num_channels()
|
||||
|
||||
# generate list of all files produced
|
||||
filelist = []
|
||||
|
||||
# dump all meta information
|
||||
metafile = outdirx.decode(encoding)+prfx+'.csv'
|
||||
td.print_meta(metafile.encode(encoding))
|
||||
filelist.append(metafile.lstrip("./"))
|
||||
|
||||
# dump all available groups and channels
|
||||
for g in range(0,numgr):
|
||||
numgrch = td.no_channels(g)
|
||||
for c in range(0,numgrch):
|
||||
# obtained overall channel id
|
||||
chid = td.obtain_channel_id(g,c)
|
||||
# get group's and channel's name
|
||||
gname = td.group_name(g)
|
||||
cname = td.channel_name(g,c)
|
||||
# use regular expression replacement to sanitize group and channel names
|
||||
gname = re.sub('[!@#$%^&*()-+= ,]','',gname)
|
||||
cname = re.sub('[!@#$%^&*()-+= ,]','',cname)
|
||||
# generate filename
|
||||
fichan = prfx + '_' + str(g+1) + '_' + str(c+1) + '_' + gname + '_' + cname + '.csv'
|
||||
# print channel
|
||||
td.print_channel(chid,(outdirx.decode(encoding)+fichan).encode(encoding))
|
||||
# append filename to list
|
||||
filelist.append(fichan)
|
||||
|
||||
# return list of all files
|
||||
return filelist
|
||||
@ -1,4 +0,0 @@
|
||||
include lib/*.hpp
|
||||
include *.cpp
|
||||
include *.pyx
|
||||
include *.pxd
|
||||
@ -1 +0,0 @@
|
||||
2.1.3
|
||||
@ -1,50 +0,0 @@
|
||||
|
||||
import tdmtermite
|
||||
import json
|
||||
import re
|
||||
|
||||
# create 'tdm_termite' instance object
|
||||
try :
|
||||
jack = tdmtermite.tdmtermite(b'samples/SineData.tdm',b'samples/SineData.tdx')
|
||||
except RuntimeError as e :
|
||||
print("failed to load/decode TDM files: " + str(e))
|
||||
|
||||
# list ids of channelgroups
|
||||
grpids = jack.get_channelgroup_ids()
|
||||
|
||||
# iterate through group-ids
|
||||
for grp in grpids[0:2] :
|
||||
|
||||
# obtain meta data of channelgroups
|
||||
grpinfo = jack.get_channelgroup_info(grp)
|
||||
print( json.dumps(grpinfo,sort_keys=False,indent=4) )
|
||||
|
||||
# get channel meta-data and compose header
|
||||
column_header = ""
|
||||
chns = grpinfo['channels'].split(' ')
|
||||
for chn in chns :
|
||||
# obtain channel's meta-data as dictionary (JSON)
|
||||
chninfo = jack.get_channel_info(chn.encode())
|
||||
# print( json.dumps(chninfo,sort_keys=False,indent=4) )
|
||||
# choose e.g. channel-id and name to compose column header
|
||||
chnhead = ( str(chninfo['channel-id']) + "("
|
||||
+ str(chninfo['name']).replace(',',' ') + ")" )
|
||||
# append to full header
|
||||
column_header = column_header + chnhead + ","
|
||||
# remove last comma
|
||||
column_header = column_header[0:-1]
|
||||
|
||||
print("column_header:\n"+column_header+"\n")
|
||||
|
||||
# write channelgroup to file
|
||||
try :
|
||||
grpname = re.sub('[^A-Za-z0-9]','',grpinfo['name'])
|
||||
grpfile = str("./channelgroup_") + str(grp.decode()) + "_" + str(grpname) + str(".csv")
|
||||
jack.print_channelgroup(grp, # id of group to be written
|
||||
grpfile.encode(), # filename
|
||||
False, # no meta-data header
|
||||
ord(','), # csv separator character
|
||||
column_header.encode() # provide column header
|
||||
)
|
||||
except RuntimeError as e :
|
||||
print("failed to print channelgroup: " + str(grp) + " : " + str(e))
|
||||
@ -1,20 +0,0 @@
|
||||
|
||||
import tdmtermite
|
||||
|
||||
# create 'tdm_termite' instance object
|
||||
try :
|
||||
jack = tdmtermite.tdmtermite(b'samples/SineData.tdm',b'samples/SineData.tdx')
|
||||
# list ids of channelgroups
|
||||
grpids = jack.get_channelgroup_ids()
|
||||
# iterate through groups
|
||||
for grp in grpids :
|
||||
# write channelgroup to file (prepend './' for local directory!!)
|
||||
grpfile = "./channelgroup_" + str(grp.decode()) + ".csv"
|
||||
jack.print_channelgroup(grp, # id of group to be written
|
||||
grpfile.encode(), # filename
|
||||
False, # include meta-data fileheader?
|
||||
ord(','), # csv separator character
|
||||
b"" # (empty=default) column header
|
||||
)
|
||||
except RuntimeError as e :
|
||||
print("failed to load/decode/write TDM files: " + str(e))
|
||||
@ -1,56 +0,0 @@
|
||||
|
||||
import tdmtermite
|
||||
# import numpy as np
|
||||
import json
|
||||
import re
|
||||
|
||||
# create 'tdm_termite' instance object
|
||||
try :
|
||||
jack = tdmtermite.tdmtermite(b'samples/SineData.tdm',b'samples/SineData.tdx')
|
||||
except RuntimeError as e :
|
||||
print("failed to load/decode TDM files: " + str(e))
|
||||
|
||||
# list ids of channelgroups
|
||||
grpids = jack.get_channelgroup_ids()
|
||||
grpids = [x.decode() for x in grpids]
|
||||
print("list of channelgroups: ",grpids)
|
||||
|
||||
for grp in grpids[0:2] :
|
||||
|
||||
# obtain meta data of channelgroups
|
||||
grpinfo = jack.get_channelgroup_info(grp.encode())
|
||||
print( json.dumps(grpinfo,sort_keys=False,indent=4) )
|
||||
|
||||
# write channelgroup to file
|
||||
try :
|
||||
grpname = re.sub('[^A-Za-z0-9]','',grpinfo['name'])
|
||||
grpfile = "./channelgroup_" + str(grp) + "_" + str(grpname) + ".csv"
|
||||
jack.print_channelgroup(grp.encode(),grpfile.encode(),True,ord(' '),b'')
|
||||
except RuntimeError as e :
|
||||
print("failed to print channelgroup: " + str(grp) + " : " + str(e))
|
||||
|
||||
# list ids of channels
|
||||
chnids = jack.get_channel_ids()
|
||||
chnids = [x.decode() for x in chnids]
|
||||
print("list of channels: ",chnids)
|
||||
|
||||
for chn in chnids[0:2] :
|
||||
|
||||
# obtain meta-data
|
||||
chninfo = jack.get_channel_info(chn.encode())
|
||||
print( json.dumps(chninfo,sort_keys=False,indent=4) )
|
||||
|
||||
# channel data
|
||||
try :
|
||||
chndata = jack.get_channel(chn.encode())
|
||||
except RuntimeError as e :
|
||||
print("failed to extract channel: " + str(chn) + " : " + str(e))
|
||||
|
||||
print(str(chndata[0:6]) + " ...")
|
||||
|
||||
# write channel to file
|
||||
chnfile = "./channel_" + str(chn) + ".csv"
|
||||
try :
|
||||
jack.print_channel(chn.encode(),chnfile.encode(),True)
|
||||
except RuntimeError as e :
|
||||
print("failed to print channel: " + str(chn) + " : " + str(e))
|
||||
@ -1,60 +0,0 @@
|
||||
|
||||
setup:
|
||||
cat ../README.md | grep '^# TDMtermite' -A 50000 > ./README.md
|
||||
#pandoc -f markdown -t rst -o README.rst README.md
|
||||
#python -m rstvalidator README.rst
|
||||
cp -r ../lib ./
|
||||
cp -r ../3rdparty ./
|
||||
cp -v ../LICENSE ./
|
||||
|
||||
setup-clean:
|
||||
rm -vf README.md README.rst LICENSE
|
||||
rm -rf lib/ 3rdparty/
|
||||
|
||||
build: setup
|
||||
python setup.py build
|
||||
|
||||
build-inplace: setup
|
||||
python setup.py build_ext --inplace
|
||||
|
||||
build-install: setup
|
||||
python setup.py install
|
||||
|
||||
build-sdist: setup
|
||||
python setup.py sdist
|
||||
python -m twine check dist/*
|
||||
|
||||
build-bdist: setup
|
||||
python setup.py bdist
|
||||
python -m twine check dist/*
|
||||
|
||||
build-clean:
|
||||
python setup.py clean --all
|
||||
rm -vf tdmtermite*.so tdmtermite*.cpp
|
||||
rm -rvf dist/ tdmtermite.egg-info/
|
||||
|
||||
cibuildwheel-build: setup
|
||||
cibuildwheel --platform linux
|
||||
|
||||
cibuildwheel-clean:
|
||||
rm -rvf wheelhouse/
|
||||
|
||||
pypi-audit:
|
||||
auditwheel repair $(shell find dist/ -name "*-linux_x86_64.whl")
|
||||
|
||||
# username: __token__
|
||||
# password: API-token including "pypi-"
|
||||
pypi-upload-test:
|
||||
python -m twine upload --repository testpypi dist/$(shell ls -t dist/ | head -n1)
|
||||
|
||||
pypi-install-test:
|
||||
python -m pip install --index-url https://test.pypi.org/simple --no-deps TDMtermite-RecordEvolution
|
||||
# python3 -m pip install -i https://test.pypi.org/simple/ TDMtermite-RecordEvolution==0.5
|
||||
|
||||
pypi-upload:
|
||||
python -m twine upload dist/$(shell ls -t dist/ | head -n1)
|
||||
|
||||
clean: setup build-clean cibuildwheel-clean setup-clean
|
||||
|
||||
run-example:
|
||||
PYTHONPATH=$(pwd) python examples/usage.py
|
||||
@ -1,6 +0,0 @@
|
||||
[build-system]
|
||||
requires = ["setuptools", "wheel","Cython"]
|
||||
build-backend = "setuptools.build_meta"
|
||||
|
||||
[tool.cibuildwheel]
|
||||
before-all = ""
|
||||
@ -1,23 +0,0 @@
|
||||
|
||||
[metadata]
|
||||
name = tdmtermite
|
||||
description = Extract and read data from National Instruments LabVIEW tdx/tdm files and export them as csv files
|
||||
long_description = file: README.md
|
||||
# long_description_content_type = text/x-rst
|
||||
long_description_content_type = text/markdown
|
||||
version = file: VERSION
|
||||
author = Record Evolution GmbH
|
||||
author_email = mario.fink@record-evolution.de
|
||||
maintainer = Record Evolution GmbH
|
||||
url= https://github.com/RecordEvolution/TDMtermite.git
|
||||
license = MIT License
|
||||
license_files = LICENSE
|
||||
keywords = TDM, TDX, National Instruments, DIAdem, LabVIEW, Measurement Studio, SignalExpress
|
||||
classifiers =
|
||||
Programming Language :: Python :: 3
|
||||
License :: OSI Approved :: MIT License
|
||||
Operating System :: OS Independent
|
||||
Topic :: Scientific/Engineering
|
||||
Topic :: Software Development :: Libraries :: Python Modules
|
||||
|
||||
[options]
|
||||
@ -1,23 +0,0 @@
|
||||
from setuptools import Extension, setup
|
||||
from Cython.Build import cythonize
|
||||
import sys
|
||||
|
||||
print("building on platform: "+sys.platform)
|
||||
|
||||
cmpArgs = {
|
||||
"linux": ['-std=c++17','-Wno-unused-variable'],
|
||||
"darwin": ['-std=c++17','-Wno-unused-variable'],
|
||||
"win32": ['/EHsc','/std:c++17']
|
||||
}
|
||||
|
||||
extension = Extension(
|
||||
"tdmtermite",
|
||||
language='c++',
|
||||
sources=["tdmtermite.pyx"],
|
||||
include_dirs=["lib","3rdparty/pugixml"],
|
||||
extra_compile_args=cmpArgs[sys.platform]
|
||||
)
|
||||
|
||||
setup(
|
||||
ext_modules=cythonize(extension,language_level=3)
|
||||
)
|
||||
@ -1,35 +0,0 @@
|
||||
|
||||
# use some C++ STL libraries
|
||||
from libcpp.string cimport string
|
||||
from libcpp.vector cimport vector
|
||||
from libcpp cimport bool
|
||||
|
||||
cdef extern from "lib/tdm_termite.cpp":
|
||||
pass
|
||||
|
||||
cdef extern from "lib/tdm_termite.hpp":
|
||||
|
||||
cdef cppclass cpptdmtermite "tdm_termite":
|
||||
|
||||
# constructor(s)
|
||||
cpptdmtermite() except +
|
||||
cpptdmtermite(string tdmfile, string tdxfile) except +
|
||||
|
||||
# provide TDM files
|
||||
void submit_files(string tdmfile, string tdxfile) except+
|
||||
|
||||
# get list of channel(-group) ids
|
||||
vector[string] get_channelgroup_ids() except+
|
||||
vector[string] get_channel_ids() except+
|
||||
|
||||
# get data of specific channel
|
||||
vector[double] get_channel_as_double(string id) except+
|
||||
|
||||
# get meta-data
|
||||
string get_channelgroup_info(string id) except+
|
||||
string get_channel_info(string id) except+
|
||||
|
||||
# print a channel(-group)
|
||||
void print_group(string id, const char* filename, bool include_meta,
|
||||
char delimiter, string column_header) except+
|
||||
void print_channel(string id, const char* filename, bool include_meta) except+
|
||||
@ -1,52 +0,0 @@
|
||||
# distutils: language = c++
|
||||
# cython: language_level = 3
|
||||
|
||||
from tdmtermite cimport cpptdmtermite
|
||||
|
||||
import json as jn
|
||||
|
||||
cdef class tdmtermite:
|
||||
|
||||
# C++ instance of class => stack allocated (requires nullary constructor!)
|
||||
cdef cpptdmtermite cpptdm
|
||||
|
||||
# constructor
|
||||
def __cinit__(self, string tdmfile, string tdxfile):
|
||||
self.cpptdm = cpptdmtermite(tdmfile,tdxfile)
|
||||
|
||||
# provide TDM files
|
||||
def submit_files(self,string tdmfile, string tdxfile):
|
||||
self.cpptdm.submit_files(tdmfile,tdxfile)
|
||||
|
||||
# get list of channel(-group) ids
|
||||
def get_channelgroup_ids(self):
|
||||
return self.cpptdm.get_channelgroup_ids()
|
||||
def get_channel_ids(self):
|
||||
return self.cpptdm.get_channel_ids()
|
||||
|
||||
# get data of specific channel
|
||||
def get_channel(self, string id):
|
||||
return self.cpptdm.get_channel_as_double(id)
|
||||
|
||||
# get meta-data of channel(-group) (as dictionary)
|
||||
def get_channelgroup_info(self, string id):
|
||||
grpstr = self.cpptdm.get_channelgroup_info(id)
|
||||
return jn.loads(grpstr.decode())
|
||||
def get_channel_info(self, string id):
|
||||
chnstr = self.cpptdm.get_channel_info(id)
|
||||
return jn.loads(chnstr.decode())
|
||||
|
||||
# print a channel(-group)
|
||||
def print_channelgroup(self, string id, const char* filename, bool include_meta,
|
||||
char delimiter, string column_header):
|
||||
self.cpptdm.print_group(id,filename,include_meta,delimiter,column_header)
|
||||
def print_channel(self, string id, const char* filename,
|
||||
bool include_meta):
|
||||
self.cpptdm.print_channel(id,filename,include_meta)
|
||||
|
||||
# print all data grouped by channelgroups
|
||||
def write_all(self, string outputdir) :
|
||||
grpids = self.cpptdm.get_channelgroup_ids()
|
||||
for id in grpids :
|
||||
grpfile = outputdir.decode() + "/channelgroup_" + id.decode() + ".csv"
|
||||
self.cpptdm.print_group(id,grpfile.encode(),True,ord(','),"".encode())
|
||||
@ -1,369 +0,0 @@
|
||||
<?xml version="1.0" encoding="UTF-8" standalone="no" ?>
|
||||
<usi:tdm xmlns:usi="http://www.ni.com/Schemas/USI/1_0" version="1.0">
|
||||
|
||||
<usi:documentation>
|
||||
<usi:exporter>National Instruments USI</usi:exporter>
|
||||
<usi:exporterVersion>1.5</usi:exporterVersion>
|
||||
</usi:documentation>
|
||||
|
||||
<usi:model modelName="National Instruments USI generated meta file" modelVersion="1.0">
|
||||
<usi:include nsUri="http://www.ni.com/DataModels/USI/TDM/1_0"/>
|
||||
</usi:model>
|
||||
|
||||
<usi:include>
|
||||
<file byteOrder="bigEndian" url="SineData-be.tdx">
|
||||
<block byteOffset="0" id="inc0" length="1000" valueType="eFloat64Usi"/>
|
||||
<block byteOffset="8000" id="inc1" length="1000" valueType="eFloat64Usi"/>
|
||||
<block byteOffset="16000" id="inc2" length="1000" valueType="eFloat64Usi"/>
|
||||
<block byteOffset="24000" id="inc3" length="1000" valueType="eFloat64Usi"/>
|
||||
<block byteOffset="32000" id="inc4" length="1000" valueType="eFloat64Usi"/>
|
||||
<block byteOffset="40000" id="inc5" length="1000" valueType="eFloat64Usi"/>
|
||||
<block byteOffset="48000" id="inc6" length="1000" valueType="eFloat64Usi"/>
|
||||
<block byteOffset="56000" id="inc7" length="1000" valueType="eFloat64Usi"/>
|
||||
<block byteOffset="64000" id="inc8" length="1000" valueType="eFloat64Usi"/>
|
||||
<block byteOffset="72000" id="inc9" length="1000" valueType="eFloat64Usi"/>
|
||||
</file>
|
||||
</usi:include>
|
||||
|
||||
<usi:data>
|
||||
<double_sequence id="usi1">
|
||||
<values external="inc0"/>
|
||||
</double_sequence>
|
||||
<double_sequence id="usi2">
|
||||
<values external="inc1"/>
|
||||
</double_sequence>
|
||||
<double_sequence id="usi3">
|
||||
<values external="inc2"/>
|
||||
</double_sequence>
|
||||
<double_sequence id="usi4">
|
||||
<values external="inc3"/>
|
||||
</double_sequence>
|
||||
<double_sequence id="usi5">
|
||||
<values external="inc4"/>
|
||||
</double_sequence>
|
||||
<double_sequence id="usi6">
|
||||
<values external="inc5"/>
|
||||
</double_sequence>
|
||||
<double_sequence id="usi7">
|
||||
<values external="inc6"/>
|
||||
</double_sequence>
|
||||
<double_sequence id="usi8">
|
||||
<values external="inc7"/>
|
||||
</double_sequence>
|
||||
<double_sequence id="usi9">
|
||||
<values external="inc8"/>
|
||||
</double_sequence>
|
||||
<double_sequence id="usi10">
|
||||
<values external="inc9"/>
|
||||
</double_sequence>
|
||||
<tdm_root id="usi11">
|
||||
<name>SineData.TDM</name>
|
||||
<description>Sine signals of various amplitudes and frequencies.</description>
|
||||
<title>SineData</title>
|
||||
<author>National Instruments</author>
|
||||
<datetime>2008-05-06T17:20:12.65074539184570313</datetime>
|
||||
<channelgroups>#xpointer(id("usi12") id("usi13"))</channelgroups>
|
||||
</tdm_root>
|
||||
<tdm_channelgroup id="usi12">
|
||||
<name>Amplitudes</name>
|
||||
<description>Sine Signals of various amplitudes.</description>
|
||||
<root>#xpointer(id("usi11"))</root>
|
||||
<instance_attributes>
|
||||
<double_attribute name="Frequency">1</double_attribute>
|
||||
</instance_attributes>
|
||||
<channels>#xpointer(id("usi14") id("usi15") id("usi16") id("usi17") id("usi18"))</channels>
|
||||
<submatrices>#xpointer(id("usi24") id("usi25") id("usi26") id("usi27") id("usi28"))</submatrices>
|
||||
</tdm_channelgroup>
|
||||
<tdm_channelgroup id="usi13">
|
||||
<name>Frequencies</name>
|
||||
<description>Sine signals of various frequencies.</description>
|
||||
<root>#xpointer(id("usi11"))</root>
|
||||
<instance_attributes>
|
||||
<double_attribute name="Amplitude">1</double_attribute>
|
||||
</instance_attributes>
|
||||
<channels>#xpointer(id("usi19") id("usi20") id("usi21") id("usi22") id("usi23"))</channels>
|
||||
<submatrices>#xpointer(id("usi29") id("usi30") id("usi31") id("usi32") id("usi33"))</submatrices>
|
||||
</tdm_channelgroup>
|
||||
<tdm_channel id="usi14">
|
||||
<name>A = 1</name>
|
||||
<group>#xpointer(id("usi12"))</group>
|
||||
<datatype>DT_DOUBLE</datatype>
|
||||
<minimum>-0.999997146387718</minimum>
|
||||
<maximum>0.999999682931835</maximum>
|
||||
<instance_attributes>
|
||||
<long_attribute name="NI_ArrayColumn">0</long_attribute>
|
||||
<long_attribute name="NI_ChannelLength">1000</long_attribute>
|
||||
<long_attribute name="NI_DataType">10</long_attribute>
|
||||
</instance_attributes>
|
||||
<local_columns>#xpointer(id("usi34"))</local_columns>
|
||||
</tdm_channel>
|
||||
<tdm_channel id="usi15">
|
||||
<name>A = 2</name>
|
||||
<group>#xpointer(id("usi12"))</group>
|
||||
<datatype>DT_DOUBLE</datatype>
|
||||
<minimum>-1.99999429277544</minimum>
|
||||
<maximum>1.99999936586367</maximum>
|
||||
<instance_attributes>
|
||||
<long_attribute name="NI_ArrayColumn">1</long_attribute>
|
||||
<long_attribute name="NI_ChannelLength">1000</long_attribute>
|
||||
<long_attribute name="NI_DataType">10</long_attribute>
|
||||
</instance_attributes>
|
||||
<local_columns>#xpointer(id("usi35"))</local_columns>
|
||||
</tdm_channel>
|
||||
<tdm_channel id="usi16">
|
||||
<name>A = 4</name>
|
||||
<group>#xpointer(id("usi12"))</group>
|
||||
<datatype>DT_DOUBLE</datatype>
|
||||
<minimum>-3.99998858555087</minimum>
|
||||
<maximum>3.99999873172734</maximum>
|
||||
<instance_attributes>
|
||||
<long_attribute name="NI_ArrayColumn">2</long_attribute>
|
||||
<long_attribute name="NI_ChannelLength">1000</long_attribute>
|
||||
<long_attribute name="NI_DataType">10</long_attribute>
|
||||
</instance_attributes>
|
||||
<local_columns>#xpointer(id("usi36"))</local_columns>
|
||||
</tdm_channel>
|
||||
<tdm_channel id="usi17">
|
||||
<name>A = 8</name>
|
||||
<group>#xpointer(id("usi12"))</group>
|
||||
<datatype>DT_DOUBLE</datatype>
|
||||
<minimum>-7.99997717110174</minimum>
|
||||
<maximum>7.99999746345468</maximum>
|
||||
<instance_attributes>
|
||||
<long_attribute name="NI_ArrayColumn">3</long_attribute>
|
||||
<long_attribute name="NI_ChannelLength">1000</long_attribute>
|
||||
<long_attribute name="NI_DataType">10</long_attribute>
|
||||
</instance_attributes>
|
||||
<local_columns>#xpointer(id("usi37"))</local_columns>
|
||||
</tdm_channel>
|
||||
<tdm_channel id="usi18">
|
||||
<name>A = 16</name>
|
||||
<group>#xpointer(id("usi12"))</group>
|
||||
<datatype>DT_DOUBLE</datatype>
|
||||
<minimum>-15.9999543422035</minimum>
|
||||
<maximum>15.9999949269094</maximum>
|
||||
<instance_attributes>
|
||||
<long_attribute name="NI_ArrayColumn">4</long_attribute>
|
||||
<long_attribute name="NI_ChannelLength">1000</long_attribute>
|
||||
<long_attribute name="NI_DataType">10</long_attribute>
|
||||
</instance_attributes>
|
||||
<local_columns>#xpointer(id("usi38"))</local_columns>
|
||||
</tdm_channel>
|
||||
<tdm_channel id="usi19">
|
||||
<name>F = 1</name>
|
||||
<group>#xpointer(id("usi13"))</group>
|
||||
<datatype>DT_DOUBLE</datatype>
|
||||
<minimum>-0.999997146387718</minimum>
|
||||
<maximum>0.999999682931835</maximum>
|
||||
<instance_attributes>
|
||||
<long_attribute name="NI_ArrayColumn">0</long_attribute>
|
||||
<long_attribute name="NI_ChannelLength">1000</long_attribute>
|
||||
<long_attribute name="NI_DataType">10</long_attribute>
|
||||
</instance_attributes>
|
||||
<local_columns>#xpointer(id("usi39"))</local_columns>
|
||||
</tdm_channel>
|
||||
<tdm_channel id="usi20">
|
||||
<name>F = 2</name>
|
||||
<group>#xpointer(id("usi13"))</group>
|
||||
<datatype>DT_DOUBLE</datatype>
|
||||
<minimum>-0.999999230697499</minimum>
|
||||
<maximum>0.999995986891472</maximum>
|
||||
<instance_attributes>
|
||||
<long_attribute name="NI_ArrayColumn">1</long_attribute>
|
||||
<long_attribute name="NI_ChannelLength">1000</long_attribute>
|
||||
<long_attribute name="NI_DataType">10</long_attribute>
|
||||
</instance_attributes>
|
||||
<local_columns>#xpointer(id("usi40"))</local_columns>
|
||||
</tdm_channel>
|
||||
<tdm_channel id="usi21">
|
||||
<name>F = 4</name>
|
||||
<group>#xpointer(id("usi13"))</group>
|
||||
<datatype>DT_DOUBLE</datatype>
|
||||
<minimum>-0.999999230697499</minimum>
|
||||
<maximum>0.99994907791452</maximum>
|
||||
<instance_attributes>
|
||||
<long_attribute name="NI_ArrayColumn">2</long_attribute>
|
||||
<long_attribute name="NI_ChannelLength">1000</long_attribute>
|
||||
<long_attribute name="NI_DataType">10</long_attribute>
|
||||
</instance_attributes>
|
||||
<local_columns>#xpointer(id("usi41"))</local_columns>
|
||||
</tdm_channel>
|
||||
<tdm_channel id="usi22">
|
||||
<name>F = 8</name>
|
||||
<group>#xpointer(id("usi13"))</group>
|
||||
<datatype>DT_DOUBLE</datatype>
|
||||
<minimum>-0.999999230697499</minimum>
|
||||
<maximum>0.999996490345607</maximum>
|
||||
<instance_attributes>
|
||||
<long_attribute name="NI_ArrayColumn">3</long_attribute>
|
||||
<long_attribute name="NI_ChannelLength">1000</long_attribute>
|
||||
<long_attribute name="NI_DataType">10</long_attribute>
|
||||
</instance_attributes>
|
||||
<local_columns>#xpointer(id("usi42"))</local_columns>
|
||||
</tdm_channel>
|
||||
<tdm_channel id="usi23">
|
||||
<name>F = 16</name>
|
||||
<group>#xpointer(id("usi13"))</group>
|
||||
<datatype>DT_DOUBLE</datatype>
|
||||
<minimum>-0.999999230697499</minimum>
|
||||
<maximum>0.999993076284592</maximum>
|
||||
<instance_attributes>
|
||||
<long_attribute name="NI_ArrayColumn">4</long_attribute>
|
||||
<long_attribute name="NI_ChannelLength">1000</long_attribute>
|
||||
<long_attribute name="NI_DataType">10</long_attribute>
|
||||
</instance_attributes>
|
||||
<local_columns>#xpointer(id("usi43"))</local_columns>
|
||||
</tdm_channel>
|
||||
<submatrix id="usi24">
|
||||
<name>Untitled</name>
|
||||
<measurement>#xpointer(id("usi12"))</measurement>
|
||||
<number_of_rows>1000</number_of_rows>
|
||||
<local_columns>#xpointer(id("usi34"))</local_columns>
|
||||
</submatrix>
|
||||
<submatrix id="usi25">
|
||||
<name>Untitled</name>
|
||||
<measurement>#xpointer(id("usi12"))</measurement>
|
||||
<number_of_rows>1000</number_of_rows>
|
||||
<local_columns>#xpointer(id("usi35"))</local_columns>
|
||||
</submatrix>
|
||||
<submatrix id="usi26">
|
||||
<name>Untitled</name>
|
||||
<measurement>#xpointer(id("usi12"))</measurement>
|
||||
<number_of_rows>1000</number_of_rows>
|
||||
<local_columns>#xpointer(id("usi36"))</local_columns>
|
||||
</submatrix>
|
||||
<submatrix id="usi27">
|
||||
<name>Untitled</name>
|
||||
<measurement>#xpointer(id("usi12"))</measurement>
|
||||
<number_of_rows>1000</number_of_rows>
|
||||
<local_columns>#xpointer(id("usi37"))</local_columns>
|
||||
</submatrix>
|
||||
<submatrix id="usi28">
|
||||
<name>Untitled</name>
|
||||
<measurement>#xpointer(id("usi12"))</measurement>
|
||||
<number_of_rows>1000</number_of_rows>
|
||||
<local_columns>#xpointer(id("usi38"))</local_columns>
|
||||
</submatrix>
|
||||
<submatrix id="usi29">
|
||||
<name>Untitled</name>
|
||||
<measurement>#xpointer(id("usi13"))</measurement>
|
||||
<number_of_rows>1000</number_of_rows>
|
||||
<local_columns>#xpointer(id("usi39"))</local_columns>
|
||||
</submatrix>
|
||||
<submatrix id="usi30">
|
||||
<name>Untitled</name>
|
||||
<measurement>#xpointer(id("usi13"))</measurement>
|
||||
<number_of_rows>1000</number_of_rows>
|
||||
<local_columns>#xpointer(id("usi40"))</local_columns>
|
||||
</submatrix>
|
||||
<submatrix id="usi31">
|
||||
<name>Untitled</name>
|
||||
<measurement>#xpointer(id("usi13"))</measurement>
|
||||
<number_of_rows>1000</number_of_rows>
|
||||
<local_columns>#xpointer(id("usi41"))</local_columns>
|
||||
</submatrix>
|
||||
<submatrix id="usi32">
|
||||
<name>Untitled</name>
|
||||
<measurement>#xpointer(id("usi13"))</measurement>
|
||||
<number_of_rows>1000</number_of_rows>
|
||||
<local_columns>#xpointer(id("usi42"))</local_columns>
|
||||
</submatrix>
|
||||
<submatrix id="usi33">
|
||||
<name>Untitled</name>
|
||||
<measurement>#xpointer(id("usi13"))</measurement>
|
||||
<number_of_rows>1000</number_of_rows>
|
||||
<local_columns>#xpointer(id("usi43"))</local_columns>
|
||||
</submatrix>
|
||||
<localcolumn id="usi34">
|
||||
<name>Untitled</name>
|
||||
<measurement_quantity>#xpointer(id("usi14"))</measurement_quantity>
|
||||
<submatrix>#xpointer(id("usi24"))</submatrix>
|
||||
<global_flag>15</global_flag>
|
||||
<independent>0</independent>
|
||||
<sequence_representation>explicit</sequence_representation>
|
||||
<values>#xpointer(id("usi1"))</values>
|
||||
</localcolumn>
|
||||
<localcolumn id="usi35">
|
||||
<name>Untitled</name>
|
||||
<measurement_quantity>#xpointer(id("usi15"))</measurement_quantity>
|
||||
<submatrix>#xpointer(id("usi25"))</submatrix>
|
||||
<global_flag>15</global_flag>
|
||||
<independent>0</independent>
|
||||
<sequence_representation>explicit</sequence_representation>
|
||||
<values>#xpointer(id("usi2"))</values>
|
||||
</localcolumn>
|
||||
<localcolumn id="usi36">
|
||||
<name>Untitled</name>
|
||||
<measurement_quantity>#xpointer(id("usi16"))</measurement_quantity>
|
||||
<submatrix>#xpointer(id("usi26"))</submatrix>
|
||||
<global_flag>15</global_flag>
|
||||
<independent>0</independent>
|
||||
<sequence_representation>explicit</sequence_representation>
|
||||
<values>#xpointer(id("usi3"))</values>
|
||||
</localcolumn>
|
||||
<localcolumn id="usi37">
|
||||
<name>Untitled</name>
|
||||
<measurement_quantity>#xpointer(id("usi17"))</measurement_quantity>
|
||||
<submatrix>#xpointer(id("usi27"))</submatrix>
|
||||
<global_flag>15</global_flag>
|
||||
<independent>0</independent>
|
||||
<sequence_representation>explicit</sequence_representation>
|
||||
<values>#xpointer(id("usi4"))</values>
|
||||
</localcolumn>
|
||||
<localcolumn id="usi38">
|
||||
<name>Untitled</name>
|
||||
<measurement_quantity>#xpointer(id("usi18"))</measurement_quantity>
|
||||
<submatrix>#xpointer(id("usi28"))</submatrix>
|
||||
<global_flag>15</global_flag>
|
||||
<independent>0</independent>
|
||||
<sequence_representation>explicit</sequence_representation>
|
||||
<values>#xpointer(id("usi5"))</values>
|
||||
</localcolumn>
|
||||
<localcolumn id="usi39">
|
||||
<name>Untitled</name>
|
||||
<measurement_quantity>#xpointer(id("usi19"))</measurement_quantity>
|
||||
<submatrix>#xpointer(id("usi29"))</submatrix>
|
||||
<global_flag>15</global_flag>
|
||||
<independent>0</independent>
|
||||
<sequence_representation>explicit</sequence_representation>
|
||||
<values>#xpointer(id("usi6"))</values>
|
||||
</localcolumn>
|
||||
<localcolumn id="usi40">
|
||||
<name>Untitled</name>
|
||||
<measurement_quantity>#xpointer(id("usi20"))</measurement_quantity>
|
||||
<submatrix>#xpointer(id("usi30"))</submatrix>
|
||||
<global_flag>15</global_flag>
|
||||
<independent>0</independent>
|
||||
<sequence_representation>explicit</sequence_representation>
|
||||
<values>#xpointer(id("usi7"))</values>
|
||||
</localcolumn>
|
||||
<localcolumn id="usi41">
|
||||
<name>Untitled</name>
|
||||
<measurement_quantity>#xpointer(id("usi21"))</measurement_quantity>
|
||||
<submatrix>#xpointer(id("usi31"))</submatrix>
|
||||
<global_flag>15</global_flag>
|
||||
<independent>0</independent>
|
||||
<sequence_representation>explicit</sequence_representation>
|
||||
<values>#xpointer(id("usi8"))</values>
|
||||
</localcolumn>
|
||||
<localcolumn id="usi42">
|
||||
<name>Untitled</name>
|
||||
<measurement_quantity>#xpointer(id("usi22"))</measurement_quantity>
|
||||
<submatrix>#xpointer(id("usi32"))</submatrix>
|
||||
<global_flag>15</global_flag>
|
||||
<independent>0</independent>
|
||||
<sequence_representation>explicit</sequence_representation>
|
||||
<values>#xpointer(id("usi9"))</values>
|
||||
</localcolumn>
|
||||
<localcolumn id="usi43">
|
||||
<name>Untitled</name>
|
||||
<measurement_quantity>#xpointer(id("usi23"))</measurement_quantity>
|
||||
<submatrix>#xpointer(id("usi33"))</submatrix>
|
||||
<global_flag>15</global_flag>
|
||||
<independent>0</independent>
|
||||
<sequence_representation>explicit</sequence_representation>
|
||||
<values>#xpointer(id("usi10"))</values>
|
||||
</localcolumn>
|
||||
</usi:data>
|
||||
|
||||
</usi:tdm>
|
||||
Binary file not shown.
@ -1,377 +0,0 @@
|
||||
<?xml version="1.0" encoding="UTF-8" standalone="no" ?>
|
||||
<usi:tdm xmlns:usi="http://www.ni.com/Schemas/USI/1_0" version="1.0">
|
||||
|
||||
<usi:documentation>
|
||||
<usi:exporter>National Instruments USI</usi:exporter>
|
||||
<usi:exporterVersion>1.5</usi:exporterVersion>
|
||||
</usi:documentation>
|
||||
|
||||
<usi:model modelName="National Instruments USI generated meta file" modelVersion="1.0">
|
||||
<usi:include nsUri="http://www.ni.com/DataModels/USI/TDM/1_0"/>
|
||||
</usi:model>
|
||||
|
||||
<usi:include>
|
||||
<file byteOrder="littleEndian" url="SineData.tdx">
|
||||
<block byteOffset="0" id="inc0" length="1000" valueType="eFloat64Usi"/>
|
||||
<block byteOffset="8000" id="inc1" length="1000" valueType="eFloat64Usi"/>
|
||||
<block byteOffset="16000" id="inc2" length="1000" valueType="eFloat64Usi"/>
|
||||
<block byteOffset="24000" id="inc3" length="1000" valueType="eFloat64Usi"/>
|
||||
<block byteOffset="32000" id="inc4" length="1000" valueType="eFloat64Usi"/>
|
||||
<block byteOffset="40000" id="inc5" length="1000" valueType="eFloat64Usi"/>
|
||||
<block byteOffset="48000" id="inc6" length="1000" valueType="eFloat64Usi"/>
|
||||
<block byteOffset="56000" id="inc7" length="1000" valueType="eFloat64Usi"/>
|
||||
<block byteOffset="64000" id="inc8" length="1000" valueType="eFloat64Usi"/>
|
||||
<block byteOffset="72000" id="inc9" length="1000" valueType="eFloat64Usi"/>
|
||||
</file>
|
||||
</usi:include>
|
||||
|
||||
<usi:data>
|
||||
<double_sequence id="usi1">
|
||||
<values external="inc0"/>
|
||||
</double_sequence>
|
||||
<double_sequence id="usi2">
|
||||
<values external="inc1"/>
|
||||
</double_sequence>
|
||||
<double_sequence id="usi3">
|
||||
<values external="inc2"/>
|
||||
</double_sequence>
|
||||
<double_sequence id="usi4">
|
||||
<values external="inc3"/>
|
||||
</double_sequence>
|
||||
<double_sequence id="usi5">
|
||||
<values external="inc4"/>
|
||||
</double_sequence>
|
||||
<double_sequence id="usi6">
|
||||
<values external="inc5"/>
|
||||
</double_sequence>
|
||||
<double_sequence id="usi7">
|
||||
<values external="inc6"/>
|
||||
</double_sequence>
|
||||
<double_sequence id="usi8">
|
||||
<values external="inc7"/>
|
||||
</double_sequence>
|
||||
<double_sequence id="usi9">
|
||||
<values external="inc8"/>
|
||||
</double_sequence>
|
||||
<double_sequence id="usi10">
|
||||
<values external="inc9"/>
|
||||
</double_sequence>
|
||||
<tdm_root id="usi11">
|
||||
<name>SineData.TDM</name>
|
||||
<description>Sine signals of various amplitudes and frequencies.</description>
|
||||
<title>SineData</title>
|
||||
<author>National Instruments</author>
|
||||
<datetime>2008-05-06T17:20:12.65074539184570313</datetime>
|
||||
<channelgroups>#xpointer(id("usi12") id("usi13"))</channelgroups>
|
||||
</tdm_root>
|
||||
<tdm_channelgroup id="usi12">
|
||||
<name>Amplitudes</name>
|
||||
<description>Sine Signals of various amplitudes.</description>
|
||||
<root>#xpointer(id("usi11"))</root>
|
||||
<instance_attributes>
|
||||
<double_attribute name="Frequency">1</double_attribute>
|
||||
</instance_attributes>
|
||||
<channels>#xpointer(id("usi14") id("usi15") id("usi16") id("usi17") id("usi18"))</channels>
|
||||
<submatrices>#xpointer(id("usi24") id("usi25") id("usi26") id("usi27") id("usi28"))</submatrices>
|
||||
</tdm_channelgroup>
|
||||
<tdm_channelgroup id="usi13">
|
||||
<name>Frequencies</name>
|
||||
<description>Sine signals of various frequencies.</description>
|
||||
<root>#xpointer(id("usi11"))</root>
|
||||
<instance_attributes>
|
||||
<double_attribute name="Amplitude">1</double_attribute>
|
||||
</instance_attributes>
|
||||
<channels>#xpointer(id("usi19") id("usi20") id("usi21") id("usi22") id("usi23"))</channels>
|
||||
<submatrices>#xpointer(id("usi29") id("usi30") id("usi31") id("usi32") id("usi33"))</submatrices>
|
||||
</tdm_channelgroup>
|
||||
<tdm_channel id="usi14">
|
||||
<name>A = 1</name>
|
||||
<group>#xpointer(id("usi12"))</group>
|
||||
<datatype>DT_DOUBLE</datatype>
|
||||
<minimum>-0.999997146387718</minimum>
|
||||
<maximum>0.999999682931835</maximum>
|
||||
<instance_attributes>
|
||||
<long_attribute name="NI_ArrayColumn">0</long_attribute>
|
||||
<long_attribute name="NI_ChannelLength">1000</long_attribute>
|
||||
<long_attribute name="NI_DataType">10</long_attribute>
|
||||
</instance_attributes>
|
||||
<local_columns>#xpointer(id("usi34"))</local_columns>
|
||||
</tdm_channel>
|
||||
<tdm_channel id="usi15">
|
||||
<name>A = 2</name>
|
||||
<group>#xpointer(id("usi12"))</group>
|
||||
<datatype>DT_DOUBLE</datatype>
|
||||
<minimum>-1.99999429277544</minimum>
|
||||
<maximum>1.99999936586367</maximum>
|
||||
<instance_attributes>
|
||||
<long_attribute name="NI_ArrayColumn">1</long_attribute>
|
||||
<long_attribute name="NI_ChannelLength">1000</long_attribute>
|
||||
<long_attribute name="NI_DataType">10</long_attribute>
|
||||
</instance_attributes>
|
||||
<local_columns>#xpointer(id("usi35"))</local_columns>
|
||||
</tdm_channel>
|
||||
<tdm_channel id="usi16">
|
||||
<name>A = 4</name>
|
||||
<group>#xpointer(id("usi12"))</group>
|
||||
<datatype>DT_DOUBLE</datatype>
|
||||
<minimum>-3.99998858555087</minimum>
|
||||
<maximum>3.99999873172734</maximum>
|
||||
<instance_attributes>
|
||||
<long_attribute name="NI_ArrayColumn">2</long_attribute>
|
||||
<long_attribute name="NI_ChannelLength">1000</long_attribute>
|
||||
<long_attribute name="NI_DataType">10</long_attribute>
|
||||
</instance_attributes>
|
||||
<local_columns>#xpointer(id("usi36"))</local_columns>
|
||||
</tdm_channel>
|
||||
<tdm_channel id="usi17">
|
||||
<name>A = 8</name>
|
||||
<group>#xpointer(id("usi12"))</group>
|
||||
<datatype>DT_DOUBLE</datatype>
|
||||
<minimum>-7.99997717110174</minimum>
|
||||
<maximum>7.99999746345468</maximum>
|
||||
<instance_attributes>
|
||||
<long_attribute name="NI_ArrayColumn">3</long_attribute>
|
||||
<long_attribute name="NI_ChannelLength">1000</long_attribute>
|
||||
<long_attribute name="NI_DataType">10</long_attribute>
|
||||
</instance_attributes>
|
||||
<local_columns>#xpointer(id("usi37"))</local_columns>
|
||||
</tdm_channel>
|
||||
<tdm_channel id="usi18">
|
||||
<name>A = 16</name>
|
||||
<group>#xpointer(id("usi12"))</group>
|
||||
<datatype>DT_DOUBLE</datatype>
|
||||
<minimum>-15.9999543422035</minimum>
|
||||
<maximum>15.9999949269094</maximum>
|
||||
<instance_attributes>
|
||||
<long_attribute name="NI_ArrayColumn">4</long_attribute>
|
||||
<long_attribute name="NI_ChannelLength">1000</long_attribute>
|
||||
<long_attribute name="NI_DataType">10</long_attribute>
|
||||
</instance_attributes>
|
||||
<local_columns>#xpointer(id("usi38"))</local_columns>
|
||||
</tdm_channel>
|
||||
<tdm_channel id="usi19">
|
||||
<name>F = 1</name>
|
||||
<group>#xpointer(id("usi13"))</group>
|
||||
<datatype>DT_DOUBLE</datatype>
|
||||
<minimum>-0.999997146387718</minimum>
|
||||
<maximum>0.999999682931835</maximum>
|
||||
<instance_attributes>
|
||||
<long_attribute name="NI_ArrayColumn">0</long_attribute>
|
||||
<long_attribute name="NI_ChannelLength">1000</long_attribute>
|
||||
<long_attribute name="NI_DataType">10</long_attribute>
|
||||
</instance_attributes>
|
||||
<local_columns>#xpointer(id("usi39"))</local_columns>
|
||||
</tdm_channel>
|
||||
<tdm_channel id="usi20">
|
||||
<name>F = 2</name>
|
||||
<group>#xpointer(id("usi13"))</group>
|
||||
<datatype>DT_DOUBLE</datatype>
|
||||
<minimum>-0.999999230697499</minimum>
|
||||
<maximum>0.999995986891472</maximum>
|
||||
<instance_attributes>
|
||||
<long_attribute name="NI_ArrayColumn">1</long_attribute>
|
||||
<long_attribute name="NI_ChannelLength">1000</long_attribute>
|
||||
<long_attribute name="NI_DataType">10</long_attribute>
|
||||
</instance_attributes>
|
||||
<local_columns>#xpointer(id("usi40"))</local_columns>
|
||||
</tdm_channel>
|
||||
<tdm_channel id="usi21">
|
||||
<name>F = 4</name>
|
||||
<group>#xpointer(id("usi13"))</group>
|
||||
<datatype>DT_DOUBLE</datatype>
|
||||
<minimum>-0.999999230697499</minimum>
|
||||
<maximum>0.99994907791452</maximum>
|
||||
<instance_attributes>
|
||||
<long_attribute name="NI_ArrayColumn">2</long_attribute>
|
||||
<long_attribute name="NI_ChannelLength">1000</long_attribute>
|
||||
<long_attribute name="NI_DataType">10</long_attribute>
|
||||
</instance_attributes>
|
||||
<local_columns>#xpointer(id("usi41"))</local_columns>
|
||||
</tdm_channel>
|
||||
<tdm_channel id="usi22">
|
||||
<name>F = 8</name>
|
||||
<group>#xpointer(id("usi13"))</group>
|
||||
<datatype>DT_DOUBLE</datatype>
|
||||
<minimum>-0.999999230697499</minimum>
|
||||
<maximum>0.999996490345607</maximum>
|
||||
<instance_attributes>
|
||||
<long_attribute name="NI_ArrayColumn">3</long_attribute>
|
||||
<long_attribute name="NI_ChannelLength">1000</long_attribute>
|
||||
<long_attribute name="NI_DataType">10</long_attribute>
|
||||
</instance_attributes>
|
||||
<local_columns>#xpointer(id("usi42"))</local_columns>
|
||||
</tdm_channel>
|
||||
<tdm_channel id="usi23">
|
||||
<name>F = 16</name>
|
||||
<group>#xpointer(id("usi13"))</group>
|
||||
<datatype>DT_DOUBLE</datatype>
|
||||
<minimum>-0.999999230697499</minimum>
|
||||
<maximum>0.999993076284592</maximum>
|
||||
<instance_attributes>
|
||||
<long_attribute name="NI_ArrayColumn">4</long_attribute>
|
||||
<long_attribute name="NI_ChannelLength">1000</long_attribute>
|
||||
<long_attribute name="NI_DataType">10</long_attribute>
|
||||
</instance_attributes>
|
||||
<local_columns>#xpointer(id("usi43"))</local_columns>
|
||||
</tdm_channel>
|
||||
<submatrix id="usi24">
|
||||
<name>Untitled</name>
|
||||
<measurement>#xpointer(id("usi12"))</measurement>
|
||||
<number_of_rows>1000</number_of_rows>
|
||||
<local_columns>#xpointer(id("usi34"))</local_columns>
|
||||
</submatrix>
|
||||
<submatrix id="usi25">
|
||||
<name>Untitled</name>
|
||||
<measurement>#xpointer(id("usi12"))</measurement>
|
||||
<number_of_rows>1000</number_of_rows>
|
||||
<local_columns>#xpointer(id("usi35"))</local_columns>
|
||||
</submatrix>
|
||||
<submatrix id="usi26">
|
||||
<name>Untitled</name>
|
||||
<measurement>#xpointer(id("usi12"))</measurement>
|
||||
<number_of_rows>1000</number_of_rows>
|
||||
<local_columns>#xpointer(id("usi36"))</local_columns>
|
||||
</submatrix>
|
||||
<submatrix id="usi27">
|
||||
<name>Untitled</name>
|
||||
<measurement>#xpointer(id("usi12"))</measurement>
|
||||
<number_of_rows>1000</number_of_rows>
|
||||
<local_columns>#xpointer(id("usi37"))</local_columns>
|
||||
</submatrix>
|
||||
<submatrix id="usi28">
|
||||
<name>Untitled</name>
|
||||
<measurement>#xpointer(id("usi12"))</measurement>
|
||||
<number_of_rows>1000</number_of_rows>
|
||||
<local_columns>#xpointer(id("usi38"))</local_columns>
|
||||
</submatrix>
|
||||
<submatrix id="usi29">
|
||||
<name>Untitled</name>
|
||||
<measurement>#xpointer(id("usi13"))</measurement>
|
||||
<number_of_rows>1000</number_of_rows>
|
||||
<local_columns>#xpointer(id("usi39"))</local_columns>
|
||||
</submatrix>
|
||||
<submatrix id="usi30">
|
||||
<name>Untitled</name>
|
||||
<measurement>#xpointer(id("usi13"))</measurement>
|
||||
<number_of_rows>1000</number_of_rows>
|
||||
<local_columns>#xpointer(id("usi40"))</local_columns>
|
||||
</submatrix>
|
||||
<submatrix id="usi31">
|
||||
<name>Untitled</name>
|
||||
<measurement>#xpointer(id("usi13"))</measurement>
|
||||
<number_of_rows>1000</number_of_rows>
|
||||
<local_columns>#xpointer(id("usi41"))</local_columns>
|
||||
</submatrix>
|
||||
<submatrix id="usi32">
|
||||
<name>Untitled</name>
|
||||
<measurement>#xpointer(id("usi13"))</measurement>
|
||||
<number_of_rows>1000</number_of_rows>
|
||||
<local_columns>#xpointer(id("usi42"))</local_columns>
|
||||
</submatrix>
|
||||
<submatrix id="usi33">
|
||||
<name>Untitled</name>
|
||||
<measurement>#xpointer(id("usi13"))</measurement>
|
||||
<number_of_rows>1000</number_of_rows>
|
||||
<local_columns>#xpointer(id("usi43"))</local_columns>
|
||||
</submatrix>
|
||||
<localcolumn id="usi34">
|
||||
<name>Untitled</name>
|
||||
<measurement_quantity>#xpointer(id("usi14"))</measurement_quantity>
|
||||
<submatrix>#xpointer(id("usi24"))</submatrix>
|
||||
<global_flag>15</global_flag>
|
||||
<independent>0</independent>
|
||||
<sequence_representation>implicit_linear</sequence_representation>
|
||||
<generation_parameters>-0.5 1.2</generation_parameters>
|
||||
<values>#xpointer(id("usi1"))</values>
|
||||
</localcolumn>
|
||||
<localcolumn id="usi35">
|
||||
<name>Untitled</name>
|
||||
<measurement_quantity>#xpointer(id("usi15"))</measurement_quantity>
|
||||
<submatrix>#xpointer(id("usi25"))</submatrix>
|
||||
<global_flag>15</global_flag>
|
||||
<independent>0</independent>
|
||||
<sequence_representation>implicit_linear</sequence_representation>
|
||||
<generation_parameters>-0.5 1.2</generation_parameters>
|
||||
<values>#xpointer(id("usi2"))</values>
|
||||
</localcolumn>
|
||||
<localcolumn id="usi36">
|
||||
<name>Untitled</name>
|
||||
<measurement_quantity>#xpointer(id("usi16"))</measurement_quantity>
|
||||
<submatrix>#xpointer(id("usi26"))</submatrix>
|
||||
<global_flag>15</global_flag>
|
||||
<independent>0</independent>
|
||||
<sequence_representation>implicit_linear</sequence_representation>
|
||||
<generation_parameters>-0.5 1.2</generation_parameters>
|
||||
<values>#xpointer(id("usi3"))</values>
|
||||
</localcolumn>
|
||||
<localcolumn id="usi37">
|
||||
<name>Untitled</name>
|
||||
<measurement_quantity>#xpointer(id("usi17"))</measurement_quantity>
|
||||
<submatrix>#xpointer(id("usi27"))</submatrix>
|
||||
<global_flag>15</global_flag>
|
||||
<independent>0</independent>
|
||||
<sequence_representation>implicit_linear</sequence_representation>
|
||||
<generation_parameters>-0.5 1.2</generation_parameters>
|
||||
<values>#xpointer(id("usi4"))</values>
|
||||
</localcolumn>
|
||||
<localcolumn id="usi38">
|
||||
<name>Untitled</name>
|
||||
<measurement_quantity>#xpointer(id("usi18"))</measurement_quantity>
|
||||
<submatrix>#xpointer(id("usi28"))</submatrix>
|
||||
<global_flag>15</global_flag>
|
||||
<independent>0</independent>
|
||||
<sequence_representation>implicit_linear</sequence_representation>
|
||||
<generation_parameters>-0.5 1.2</generation_parameters>
|
||||
<values>#xpointer(id("usi5"))</values>
|
||||
</localcolumn>
|
||||
<localcolumn id="usi39">
|
||||
<name>Untitled</name>
|
||||
<measurement_quantity>#xpointer(id("usi19"))</measurement_quantity>
|
||||
<submatrix>#xpointer(id("usi29"))</submatrix>
|
||||
<global_flag>15</global_flag>
|
||||
<independent>0</independent>
|
||||
<sequence_representation>implicit_linear</sequence_representation>
|
||||
<generation_parameters>-0.5 1.2</generation_parameters>
|
||||
<values>#xpointer(id("usi6"))</values>
|
||||
</localcolumn>
|
||||
<localcolumn id="usi40">
|
||||
<name>Untitled</name>
|
||||
<measurement_quantity>#xpointer(id("usi20"))</measurement_quantity>
|
||||
<submatrix>#xpointer(id("usi30"))</submatrix>
|
||||
<global_flag>15</global_flag>
|
||||
<independent>0</independent>
|
||||
<sequence_representation>implicit_linear</sequence_representation>
|
||||
<generation_parameters>-0.5 1.2</generation_parameters>
|
||||
<values>#xpointer(id("usi7"))</values>
|
||||
</localcolumn>
|
||||
<localcolumn id="usi41">
|
||||
<name>Untitled</name>
|
||||
<measurement_quantity>#xpointer(id("usi21"))</measurement_quantity>
|
||||
<submatrix>#xpointer(id("usi31"))</submatrix>
|
||||
<global_flag>15</global_flag>
|
||||
<independent>0</independent>
|
||||
<sequence_representation>implicit_linear</sequence_representation>
|
||||
<generation_parameters>-0.0 1.0</generation_parameters>
|
||||
<values>#xpointer(id("usi8"))</values>
|
||||
</localcolumn>
|
||||
<localcolumn id="usi42">
|
||||
<name>Untitled</name>
|
||||
<measurement_quantity>#xpointer(id("usi22"))</measurement_quantity>
|
||||
<submatrix>#xpointer(id("usi32"))</submatrix>
|
||||
<global_flag>15</global_flag>
|
||||
<independent>0</independent>
|
||||
<sequence_representation>explicit</sequence_representation>
|
||||
<values>#xpointer(id("usi9"))</values>
|
||||
</localcolumn>
|
||||
<localcolumn id="usi43">
|
||||
<name>Untitled</name>
|
||||
<measurement_quantity>#xpointer(id("usi23"))</measurement_quantity>
|
||||
<submatrix>#xpointer(id("usi33"))</submatrix>
|
||||
<global_flag>15</global_flag>
|
||||
<independent>0</independent>
|
||||
<sequence_representation>implicit_linear</sequence_representation>
|
||||
<values>#xpointer(id("usi10"))</values>
|
||||
</localcolumn>
|
||||
</usi:data>
|
||||
|
||||
</usi:tdm>
|
||||
@ -1,63 +0,0 @@
|
||||
|
||||
#include <iostream>
|
||||
#include <fstream>
|
||||
#include <iterator>
|
||||
#include <vector>
|
||||
|
||||
int main(int argc, char* argv[])
|
||||
{
|
||||
for ( int i = 0; i < argc; i++ )
|
||||
{
|
||||
std::cout<<argv[i]<<"\n";
|
||||
}
|
||||
if ( argc < 3 )
|
||||
{
|
||||
std::cout<<"missing file argument\n";
|
||||
return 1;
|
||||
}
|
||||
|
||||
std::ifstream fin(argv[1],std::ifstream::binary);
|
||||
|
||||
std::vector<unsigned char> tdxbuf((std::istreambuf_iterator<char>(fin)),
|
||||
(std::istreambuf_iterator<char>()));
|
||||
|
||||
fin.close();
|
||||
|
||||
std::cout<<"length of buffer: "<<tdxbuf.size()<<"\n";
|
||||
|
||||
|
||||
unsigned long int dtsize = 8;
|
||||
|
||||
if ( tdxbuf.size()%dtsize != 0 )
|
||||
{
|
||||
std::cout<<"mismatch between datatype size and length of buffer\n";
|
||||
return 1;
|
||||
}
|
||||
|
||||
|
||||
unsigned long int nums = tdxbuf.size()/dtsize;
|
||||
|
||||
std::cout<<"number of entities: "<<nums<<"\n";
|
||||
|
||||
std::vector<unsigned char> tdxbufrev(tdxbuf.size());
|
||||
|
||||
for ( unsigned long int i = 0; i < nums; i++ )
|
||||
{
|
||||
for ( unsigned long int j = 0; j < dtsize; j++ )
|
||||
{
|
||||
tdxbufrev[i*dtsize+j] = tdxbuf[(i+1)*dtsize-(j+1)];
|
||||
}
|
||||
}
|
||||
|
||||
std::ofstream fou(argv[2],std::ifstream::binary);
|
||||
|
||||
for ( unsigned char ch: tdxbufrev)
|
||||
{
|
||||
fou<<ch;
|
||||
}
|
||||
|
||||
fou.close();
|
||||
|
||||
return 0;
|
||||
}
|
||||
|
||||
19
setup.py
Normal file
19
setup.py
Normal file
@ -0,0 +1,19 @@
|
||||
from distutils.core import setup
|
||||
from distutils.extension import Extension
|
||||
from Cython.Build import cythonize
|
||||
|
||||
extensions = Extension(
|
||||
name="tdm_ripper",
|
||||
sources=["pytdm_ripper.pyx"],
|
||||
# libraries=[""],
|
||||
library_dirs=["lib"],
|
||||
include_dirs=["lib"],
|
||||
language='c++',
|
||||
extra_compile_args=['-std=c++11','-Wno-unused-variable'],
|
||||
extra_link_args=['-std=c++11'],
|
||||
)
|
||||
|
||||
setup(
|
||||
name="tdm_ripper",
|
||||
ext_modules=cythonize(extensions)
|
||||
)
|
||||
19
setup_osx.py
Normal file
19
setup_osx.py
Normal file
@ -0,0 +1,19 @@
|
||||
from distutils.core import setup
|
||||
from distutils.extension import Extension
|
||||
from Cython.Build import cythonize
|
||||
|
||||
extensions = Extension(
|
||||
name="tdm_ripper",
|
||||
sources=["pytdm_ripper.pyx"],
|
||||
# libraries=[""],
|
||||
library_dirs=["lib"],
|
||||
include_dirs=["lib"],
|
||||
language='c++',
|
||||
extra_compile_args=['-stdlib=libc++','-std=c++11','-Wno-unused-variable'],
|
||||
extra_link_args=['-stdlib=libc++','-std=c++11'],
|
||||
)
|
||||
|
||||
setup(
|
||||
name="tdm_ripper",
|
||||
ext_modules=cythonize(extensions)
|
||||
)
|
||||
400
src/main.cpp
400
src/main.cpp
@ -1,400 +0,0 @@
|
||||
// ------------------------------------------------------------------------- //
|
||||
|
||||
#include "tdm_termite.hpp"
|
||||
|
||||
#include <filesystem>
|
||||
#include <regex>
|
||||
#include <thread>
|
||||
#include <chrono>
|
||||
|
||||
// ------------------------------------------------------------------------- //
|
||||
|
||||
const std::string gittag("TAGSTRING");
|
||||
const std::string githash("HASHSTRING");
|
||||
const std::string timestamp("TIMESTAMPSTRING");
|
||||
|
||||
void show_usage()
|
||||
{
|
||||
std::cout<<"\n"
|
||||
<<"tdmtermite ["<<gittag<<"-g"<<githash<<"-"<<timestamp<<"] (https://github.com/RecordEvolution/TDMtermite.git)"
|
||||
<<"\n\n"
|
||||
<<"Decode TDM/TDX files and dump data as *.csv"
|
||||
<<"\n\n"
|
||||
<<"Usage:\n\n"
|
||||
<<" tdmtermite <tdm-file> <tdx-file> [options]"
|
||||
<<"\n\n"
|
||||
<<"Options:"
|
||||
<<"\n\n"
|
||||
<<" -m, --showmeta show meta information about tdm dataset\n"
|
||||
<<" -r, --showroot show root data of dataset\n"
|
||||
<<" -g, --listgroups list channelgroups\n"
|
||||
<<" -c, --listchannels list channels\n"
|
||||
<<" -b, --listblocks list TDX blocks\n"
|
||||
<<" -u, --listsubmatrices list submatrices\n"
|
||||
<<" -l, --listlocalcolumns list localcolumns\n"
|
||||
// <<"options with arguments must be provided as '--option arg' or '-o arg'\n"
|
||||
<<" -d, --output (existing) output directory (default: no default)\n"
|
||||
<<" -f, --filenames If an output directory is provided, all channels\n"
|
||||
<<" of the dataset will be written to file(s).\n"
|
||||
<<" The filenaming rule using %C (channel index), %c (channel name),\n"
|
||||
<<" %G (group index), %g (group name) \n"
|
||||
<<" determines whether the channels are collected in files according\n"
|
||||
<<" to their channelgroups (as long as the filenaming rule includes\n"
|
||||
<<" %G or %g) or written in separate files. For instance, to obtain\n"
|
||||
<<" files with only one channel each use '--f channel_%C_%c.csv'.\n"
|
||||
<<" (default: '--filenames channelgroup_%G.csv' )\n"
|
||||
<<" -s, --csvsep separator character used in .csv files (default is comma '--csvsep ,')\n"
|
||||
<<" -i, --includemeta include channel(-group) meta-data into files\n"
|
||||
<<" -h, --help show this help message \n"
|
||||
<<" -v, --version display version\n"
|
||||
<<"\n";
|
||||
}
|
||||
|
||||
// ------------------------------------------------------------------------- //
|
||||
|
||||
// define type of key-value map object
|
||||
typedef std::map<std::string,std::string> optkeys;
|
||||
|
||||
const std::string argmsg = std::string("both .tdm and .tdx file must be provided!");
|
||||
const std::string arguse = std::string("see $ tdmtermite --help for usage");
|
||||
|
||||
optkeys parse_args(int argc, char* argv[], bool showargs = false)
|
||||
{
|
||||
if ( showargs )
|
||||
{
|
||||
std::cout<<"number of CLI-arguments: "<<argc<<"\n";
|
||||
for ( int i = 0; i < argc; i++ ) std::cout<<i<<": "<<argv[i]<<"\n";
|
||||
}
|
||||
|
||||
// declare empty key-value object
|
||||
optkeys prsdkeys;
|
||||
|
||||
if ( argc == 2 )
|
||||
{
|
||||
if ( std::string(argv[1]) == std::string("--help")
|
||||
|| std::string(argv[1]) == std::string("-h") )
|
||||
{
|
||||
show_usage();
|
||||
}
|
||||
else if ( std::string(argv[1]) == std::string("--version")
|
||||
|| std::string(argv[1]) == std::string("-v") )
|
||||
{
|
||||
std::cout<<"tdmtermite "<<gittag<<"-g"<<githash<<"-"<<timestamp<<"\n";
|
||||
}
|
||||
else
|
||||
{
|
||||
std::cerr<<argmsg + std::string("\n") + arguse + std::string("\n");
|
||||
prsdkeys.insert(std::pair<std::string,std::string>("invalidoption",argv[1]));
|
||||
return prsdkeys;
|
||||
}
|
||||
}
|
||||
else if ( argc > 2 )
|
||||
{
|
||||
// tdm file
|
||||
if ( std::string(argv[1]).find(std::string(".tdm")) != std::string::npos )
|
||||
{
|
||||
prsdkeys.insert(std::pair<std::string,std::string>("tdm",argv[1]));
|
||||
}
|
||||
else
|
||||
{
|
||||
std::string tdmerr = std::string(argv[1])
|
||||
+ std::string(" does not look like a .tdm file")
|
||||
+ std::string(", evtl. add file extension *.tdm")
|
||||
+ std::string("\n") + arguse;
|
||||
std::cerr<<tdmerr + std::string("\n");
|
||||
prsdkeys.insert(std::pair<std::string,std::string>("invalidoption",argv[1]));
|
||||
return prsdkeys;
|
||||
}
|
||||
// tdx file
|
||||
if ( std::string(argv[2]).find(std::string(".tdx")) != std::string::npos )
|
||||
{
|
||||
prsdkeys.insert(std::pair<std::string,std::string>("tdx",argv[2]));
|
||||
}
|
||||
else
|
||||
{
|
||||
std::string tdxerr = std::string(argv[2])
|
||||
+ std::string(" does not look like a .tdx file")
|
||||
+ std::string(", evtl. add file extension *.tdx")
|
||||
+ std::string("\n") + arguse;
|
||||
std::cerr<<tdxerr + std::string("\n");
|
||||
prsdkeys.insert(std::pair<std::string,std::string>("invalidoption",argv[2]));
|
||||
return prsdkeys;
|
||||
}
|
||||
|
||||
// options (in any order)
|
||||
for ( int i = 3; i < argc; i++ )
|
||||
{
|
||||
if ( std::string(argv[i]) == std::string("--showmeta")
|
||||
|| std::string(argv[i]) == std::string("-m") )
|
||||
{
|
||||
prsdkeys.insert(std::pair<std::string,std::string>("showmeta","showmeta"));
|
||||
}
|
||||
else if ( std::string(argv[i]) == std::string("--showroot")
|
||||
|| std::string(argv[i]) == std::string("-r") )
|
||||
{
|
||||
prsdkeys.insert(std::pair<std::string,std::string>("showroot","showroot"));
|
||||
}
|
||||
else if ( std::string(argv[i]) == std::string("--listgroups")
|
||||
|| std::string(argv[i]) == std::string("-g") )
|
||||
{
|
||||
prsdkeys.insert(std::pair<std::string,std::string>("listgroups","listgroups"));
|
||||
}
|
||||
else if ( std::string(argv[i]) == std::string("--listchannels")
|
||||
|| std::string(argv[i]) == std::string("-c") )
|
||||
{
|
||||
prsdkeys.insert(std::pair<std::string,std::string>("listchannels","listchannels"));
|
||||
}
|
||||
else if ( std::string(argv[i]) == std::string("--listblocks")
|
||||
|| std::string(argv[i]) == std::string("-b") )
|
||||
{
|
||||
prsdkeys.insert(std::pair<std::string,std::string>("listblocks","listblocks"));
|
||||
}
|
||||
else if ( std::string(argv[i]) == std::string("--listsubmatrices")
|
||||
|| std::string(argv[i]) == std::string("-u") )
|
||||
{
|
||||
prsdkeys.insert(std::pair<std::string,std::string>("listsubmatrices","listsubmatrices"));
|
||||
}
|
||||
else if ( std::string(argv[i]) == std::string("--listlocalcolumns")
|
||||
|| std::string(argv[i]) == std::string("-l") )
|
||||
{
|
||||
prsdkeys.insert(std::pair<std::string,std::string>("listlocalcolumns","listlocalcolumns"));
|
||||
}
|
||||
//
|
||||
else if ( std::string(argv[i]) == std::string("--output")
|
||||
|| std::string(argv[i]) == std::string("-d") )
|
||||
{
|
||||
if ( argc > i+1 )
|
||||
{
|
||||
prsdkeys.insert(std::pair<std::string,std::string>("output",argv[i+1]));
|
||||
i += 1;
|
||||
}
|
||||
else
|
||||
{
|
||||
std::cerr<<"missing argument for "<<argv[i]<<"\n";
|
||||
prsdkeys.insert(std::pair<std::string,std::string>("invalidoption",""));
|
||||
}
|
||||
}
|
||||
else if ( std::string(argv[i]) == std::string("--filenames")
|
||||
|| std::string(argv[i]) == std::string("-f") )
|
||||
{
|
||||
if ( argc > i+1 )
|
||||
{
|
||||
prsdkeys.insert(std::pair<std::string,std::string>("filenames",argv[i+1]));
|
||||
i += 1;
|
||||
}
|
||||
else
|
||||
{
|
||||
std::cerr<<"missing argument for "<<argv[i]<<"\n";
|
||||
prsdkeys.insert(std::pair<std::string,std::string>("invalidoption",""));
|
||||
}
|
||||
}
|
||||
else if ( std::string(argv[i]) == std::string("--csvsep")
|
||||
|| std::string(argv[i]) == std::string("-s") )
|
||||
{
|
||||
if ( argc > i+1 )
|
||||
{
|
||||
if ( std::string(argv[i+1]).size() == 1 )
|
||||
{
|
||||
prsdkeys.insert(std::pair<std::string,std::string>("csvsep",argv[i+1]));
|
||||
i += 1;
|
||||
}
|
||||
else
|
||||
{
|
||||
std::cerr<<"invalid argument of --csvsep\n";
|
||||
prsdkeys.insert(std::pair<std::string,std::string>("invalidoption",argv[i+1]));
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
std::cerr<<"missing argument for "<<argv[i]<<"\n";
|
||||
prsdkeys.insert(std::pair<std::string,std::string>("invalidoption",""));
|
||||
}
|
||||
}
|
||||
//
|
||||
else if ( std::string(argv[i]) == std::string("--includemeta")
|
||||
|| std::string(argv[i]) == std::string("-i") )
|
||||
{
|
||||
prsdkeys.insert(std::pair<std::string,std::string>("includemeta","includemeta"));
|
||||
}
|
||||
else
|
||||
{
|
||||
std::string argerr = std::string("unkown option '") + argv[i] + std::string("'");
|
||||
std::cerr<<argerr + std::string("\n") + arguse + std::string("\n");
|
||||
prsdkeys.insert(std::pair<std::string,std::string>("invalidoption",argv[i]));
|
||||
return prsdkeys;
|
||||
}
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
std::cerr<<argmsg + std::string("\n") + arguse + std::string("\n");
|
||||
}
|
||||
|
||||
return prsdkeys;
|
||||
}
|
||||
|
||||
// ------------------------------------------------------------------------- //
|
||||
|
||||
int main(int argc, char* argv[])
|
||||
{
|
||||
// parse CLI arguments
|
||||
optkeys cfgopts = parse_args(argc,argv);
|
||||
|
||||
// show all CLI arguments
|
||||
if ( false )
|
||||
{
|
||||
for ( optkeys::iterator it=cfgopts.begin(); it!=cfgopts.end(); ++it )
|
||||
{
|
||||
std::cout<<std::setw(20)<<std::left<<it->first<<it->second<<"\n";
|
||||
}
|
||||
}
|
||||
|
||||
// exit on any invalid option
|
||||
if ( cfgopts.count("tdm") == 1 && cfgopts.count("tdx") == 1
|
||||
&& cfgopts.count("invalidoption") == 0 )
|
||||
{
|
||||
// get options
|
||||
bool showmeta = cfgopts.count("showmeta") == 1 ? true : false;
|
||||
bool showroot = cfgopts.count("showroot") == 1 ? true : false;
|
||||
bool listgroups = cfgopts.count("listgroups") == 1 ? true : false;
|
||||
bool listchannels = cfgopts.count("listchannels") == 1 ? true : false;
|
||||
bool listblocks = cfgopts.count("listblocks") == 1 ? true : false;
|
||||
bool listsubmatrices = cfgopts.count("listsubmatrices") == 1 ? true : false;
|
||||
bool listlocalcolumns = cfgopts.count("listlocalcolumns") == 1 ? true : false;
|
||||
bool includemeta = cfgopts.count("includemeta") == 1 ? true : false;
|
||||
|
||||
// set required option values
|
||||
std::string output = cfgopts.count("output") == 1 ? cfgopts.at("output")
|
||||
: std::string("");
|
||||
std::string files = cfgopts.count("filenames") == 1 ? cfgopts.at("filenames")
|
||||
: std::string("channelgroup_%G.csv");
|
||||
std::string csvsep = cfgopts.count("csvsep") == 1 ? cfgopts.at("csvsep")
|
||||
: std::string(",");
|
||||
|
||||
// declare and initialize tdm_termite instance
|
||||
tdm_termite jack;
|
||||
try {
|
||||
jack.submit_files(cfgopts.at("tdm"),cfgopts.at("tdx"),false);
|
||||
} catch (const std::exception& e) {
|
||||
throw std::runtime_error( std::string("failed to load/parse tdm/tdx files: ")
|
||||
+ e.what() );
|
||||
}
|
||||
|
||||
// show some meta data of the dataset
|
||||
if ( showmeta ) std::cout<<"\n"<<jack.get_meta().get_info()<<"\n";
|
||||
if ( showroot ) std::cout<<"\n"<<jack.get_root().get_info()<<"\n";
|
||||
|
||||
// get complete channel(-group) overview
|
||||
format grpformatter(16,false,false,' ');
|
||||
if (listgroups) std::cout<<"\n"<<jack.get_overview<tdm_channelgroup>(grpformatter)<<"\n";
|
||||
format chformatter(16,false,false,' ');
|
||||
if (listchannels) std::cout<<"\n"<<jack.get_channel_overview(chformatter)<<"\n";
|
||||
|
||||
// get complete submatrix/localcolumns overview
|
||||
format formatter(16,false,false,' ');
|
||||
if (listblocks) std::cout<<jack.get_overview<block>(formatter)<<"\n";
|
||||
if (listsubmatrices) std::cout<<jack.get_overview<submatrix>(formatter)<<"\n";
|
||||
if (listlocalcolumns) std::cout<<jack.get_overview<localcolumn>(formatter)<<"\n";
|
||||
|
||||
// print data to files
|
||||
if ( !output.empty() )
|
||||
{
|
||||
// declare filesystem path
|
||||
std::filesystem::path pd = output;
|
||||
|
||||
// check for given directory
|
||||
if ( std::filesystem::is_directory(pd) )
|
||||
{
|
||||
// obtain channelgroup ids
|
||||
std::vector<std::string> chgrids = jack.get_channelgroup_ids();
|
||||
|
||||
// check for any existing group-id in filenames rule
|
||||
std::string slctgrp("");
|
||||
for ( auto id: chgrids ) if ( files.find(id) != std::string::npos ) slctgrp = id;
|
||||
|
||||
// obtain list of channel ids
|
||||
std::vector<std::string> chids = jack.get_channel_ids();
|
||||
|
||||
// check for any existing channel-id in filenames rule
|
||||
std::string slctchn("");
|
||||
for ( auto id: chids ) if ( files.find(id) != std::string::npos ) slctchn = id;
|
||||
|
||||
// write channels in files grouped by channelgroups
|
||||
if ( files.find("%G") != std::string::npos || files.find("%g") != std::string::npos
|
||||
|| !slctgrp.empty() )
|
||||
{
|
||||
// iterate through channelgroup ids
|
||||
for ( auto id: chgrids )
|
||||
{
|
||||
// write all channelgroups or single chosen one
|
||||
if ( slctgrp.empty() || slctgrp == id )
|
||||
{
|
||||
// get and sanitize group name
|
||||
tdm_channelgroup tdmgrp = jack.channelgroup(id);
|
||||
std::string grpnm = tdmgrp.name_;
|
||||
std::regex regg("([^A-Za-z0-9])");
|
||||
std::string grpname = std::regex_replace(grpnm,regg,"");
|
||||
|
||||
// construct file name according to filenaming rule
|
||||
std::string filenm = files;
|
||||
filenm = std::regex_replace(filenm,std::regex("\\%G"),tdmgrp.id_);
|
||||
filenm = std::regex_replace(filenm,std::regex("\\%g"),grpname);
|
||||
|
||||
// concat paths
|
||||
std::filesystem::path outfile = pd / filenm;
|
||||
|
||||
// write entire channelgroup to file
|
||||
jack.print_group(id,outfile.c_str(),includemeta,csvsep.at(0));
|
||||
}
|
||||
}
|
||||
}
|
||||
// ...or write channels separately
|
||||
else
|
||||
{
|
||||
// iterate through channel ids
|
||||
for ( auto id: chids )
|
||||
{
|
||||
// write all channelgroups or single chosen one
|
||||
if ( slctchn.empty() || slctchn == id )
|
||||
{
|
||||
// get and sanitize channel name
|
||||
tdm_channel tdmchn = jack.channel(id);
|
||||
std::string chnnm = tdmchn.name_;
|
||||
std::regex regg("([^A-Za-z0-9])");
|
||||
std::string chnname = std::regex_replace(chnnm,regg,"");
|
||||
|
||||
// construct file name according to filenaming rule
|
||||
std::string filenm = files;
|
||||
filenm = std::regex_replace(filenm,std::regex("\\%C"),tdmchn.id_);
|
||||
filenm = std::regex_replace(filenm,std::regex("\\%c"),chnname);
|
||||
|
||||
// concat paths
|
||||
std::filesystem::path outfile = pd / filenm;
|
||||
|
||||
// write entire channelgroup to file
|
||||
jack.print_channel(id,outfile.c_str(),includemeta);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
std::cerr<<std::string("directory '") + output
|
||||
+ std::string("' does not exist") + std::string("\n");
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
if ( cfgopts.count("showmeta") == 0 && cfgopts.count("showroot") == 0
|
||||
&& cfgopts.count("listgroups") == 0 && cfgopts.count("listchannels") == 0
|
||||
&& cfgopts.count("listblocks") == 0 && cfgopts.count("listsubmatrices") == 0
|
||||
&& cfgopts.count("listlocalcolumns") == 0 ) std::cerr<<"no output directory given\n";
|
||||
}
|
||||
}
|
||||
|
||||
// std::this_thread::sleep_for(std::chrono::milliseconds(10000));
|
||||
|
||||
return 0;
|
||||
}
|
||||
|
||||
// ------------------------------------------------------------------------- //
|
||||
33
src/test.cpp
33
src/test.cpp
@ -1,33 +0,0 @@
|
||||
// ------------------------------------------------------------------------- //
|
||||
|
||||
#include "tdm_termite.hpp"
|
||||
|
||||
#include <filesystem>
|
||||
#include <regex>
|
||||
#include <thread>
|
||||
#include <chrono>
|
||||
|
||||
// ------------------------------------------------------------------------- //
|
||||
|
||||
int main(int argc, char* argv[])
|
||||
{
|
||||
std::string tdmfile(argv[1]);
|
||||
std::string tdxfile(argv[2]);
|
||||
|
||||
std::cout<<tdmfile<<"\n"<<tdxfile<<"\n";
|
||||
|
||||
pugi::xml_document xml_doc;
|
||||
pugi::xml_parse_result xml_result;
|
||||
|
||||
// load XML document from stream
|
||||
std::ifstream fin(tdmfile.c_str());
|
||||
xml_result = xml_doc.load(fin);
|
||||
fin.close();
|
||||
|
||||
std::cout<<"\nloading "<<tdmfile<<": "<<xml_result.description()<<"\n";
|
||||
std::cout<<"encoding: "<<(pugi::xml_encoding)xml_result.encoding<<"\n\n";
|
||||
|
||||
std::this_thread::sleep_for(std::chrono::milliseconds(4000));
|
||||
|
||||
return 0;
|
||||
}
|
||||
36
tdm_ripper.pxd
Normal file
36
tdm_ripper.pxd
Normal file
@ -0,0 +1,36 @@
|
||||
# cython: language_level = 3
|
||||
# distutils: language = c++
|
||||
|
||||
# use some C++ STL libraries
|
||||
from libcpp.string cimport string
|
||||
from libcpp.vector cimport vector
|
||||
from libcpp cimport bool
|
||||
|
||||
cdef extern from "tdm_ripper.cpp":
|
||||
pass
|
||||
|
||||
cdef extern from "tdm_ripper.hpp":
|
||||
cdef cppclass tdm_ripper:
|
||||
tdm_ripper(string,string) except +
|
||||
void list_channels()
|
||||
void list_groups()
|
||||
int num_channels()
|
||||
int no_channels(int)
|
||||
int num_groups()
|
||||
int no_channel_groups()
|
||||
string channel_name(int,int)
|
||||
string group_name(int)
|
||||
string channel_unit(int,int)
|
||||
int channel_exists(int,string)
|
||||
int obtain_channel_id(int,int)
|
||||
vector[double] get_channel(int)
|
||||
int channel_length(int,int)
|
||||
string time_stamp(int,bool)
|
||||
double get_min(int,int)
|
||||
double get_max(int,int)
|
||||
vector[double] channel(int,int)
|
||||
void print_channel(int,const char*)
|
||||
string get_meta(string attribute_name)
|
||||
void print_meta(const char*)
|
||||
# dummy method for compatibility
|
||||
void close()
|
||||
Loading…
x
Reference in New Issue
Block a user